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Name : HMPREF0421_20698 (HMPREF0421_20698) Accession : YP_003985803.1 Strain : Gardnerella vaginalis ATCC 14019 Genome accession: NC_014644 Putative virulence/resistance : Resistance Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1136 EC number : 3.6.3.- Position : 858388 - 859215 bp Length : 828 bp Strand : + Note : COG: COG1136; Pfam: PF00005; InterPro: IPR003593 DNA sequence : ATGAGTGTTGAAAATAGTCAAGATACGCGTTTTACGCAAATGAATTATTCCGCTCAAGAAGGTTTGATTGGCGAGACTGC GGTTGCAGCTTTGCATGTTGTTAAAGATTTTGGCAAGGGTGCAGGCATTGTTCACGCTTTGCGAGATGTAAGCGTTAGTT TCGAGCGCGGCAAGTTTACTGCGATTATGGGTCCTTCGGGTTCTGGAAAGTCAACTTTAATGCATTCTTTGGCTGGTCTT GACAGCGTTAATTCTGGAAAAGTTTTGGTTGACGGCCTAGATATTACAGGCATGAGTGATAAGCAGCTTACGCTTATGCG CCGCGAGATGGTTGGTTTTATTTTCCAAAGTTTTAATCTTCTTCCAATGTTTAGCGCTGAGCAAAATATTCTTATGCCTC TTACTTTGGCAGGCAAAAAGCCAGATAAGCAATGGTTTAATACTTTGGTTAATACTCTTGGCTTGCAAGATCGTTTAAAG CATCGGCCTGCTGAGCTTTCTGGTGGTCAGCGTCAACGCGTTGCAATTGCTCGAGCTTTAATCTCTAAGCCTTCCGTAGT TTTTGCAGACGAGCCTACTGGCAATCTCGACTCTGCTTCCAGCTTGGAAGTTTTGCATTTCTTGAAGAAGTCTGTAACGG AGCTTGGTCAAACTGTGATTATGGTTACTCACGACGCTGTTGCAGCGTCTTACGCGGATCGAGCAATCGTGTTTGCAGAT GGTCAAATCGTTGAAGACGTGCAAAATCCTACTGCAGAAGGAATGAGCAAGATGCTTATGGAGCGTAGCGAGGCTGGCGT TAATAATCAGCCTGCTCAATTGCAATAA Protein sequence : MSVENSQDTRFTQMNYSAQEGLIGETAVAALHVVKDFGKGAGIVHALRDVSVSFERGKFTAIMGPSGSGKSTLMHSLAGL DSVNSGKVLVDGLDITGMSDKQLTLMRREMVGFIFQSFNLLPMFSAEQNILMPLTLAGKKPDKQWFNTLVNTLGLQDRLK HRPAELSGGQRQRVAIARALISKPSVVFADEPTGNLDSASSLEVLHFLKKSVTELGQTVIMVTHDAVAASYADRAIVFAD GQIVEDVQNPTAEGMSKMLMERSEAGVNNQPAQLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 5e-36 | 43 |
| CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 5e-38 | 42 |
| cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 5e-38 | 42 |
| CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 5e-38 | 42 |
| cur_1502 | YP_001800896.1 | cell division ATP-binding protein FtsE | Not tested | Not named | Protein | 9e-29 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HMPREF0421_20698 | YP_003985803.1 | ABC transporter ATP-binding protein | CP001581.1.gene798.p | Protein | 1e-45 | 49 |
| HMPREF0421_20698 | YP_003985803.1 | ABC transporter ATP-binding protein | CP001581.1.gene598.p | Protein | 3e-48 | 47 |
| HMPREF0421_20698 | YP_003985803.1 | ABC transporter ATP-binding protein | NC_008702.1.4606598. | Protein | 1e-37 | 46 |
| HMPREF0421_20698 | YP_003985803.1 | ABC transporter ATP-binding protein | NC_012469.1.7686878. | Protein | 2e-41 | 42 |
