Gene Information

Name : Calhy_1386 (Calhy_1386)
Accession : YP_003992472.1
Strain : Caldicellulosiruptor hydrothermalis 108
Genome accession: NC_014652
Putative virulence/resistance : Unknown
Product : ribonuclease h
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 1421234 - 1421671 bp
Length : 438 bp
Strand : -
Note : KEGG: ate:Athe_1340 ribonuclease H; PFAM: ribonuclease H

DNA sequence :
ATGAAAGAAGTGACAATTTACACCGACGGTGCTTGCAGCGGAAATCCTGGACCAGGCGGATGGTGTGCTATACTCATATA
CAAAGGAATCAGGAAGGTGTTAAAAGGCTTTGAAAGGTATACAACCAATAACAGAATGGAGCTCAAAGCGGTTGTGGAAG
CTCTAAAGGCGTTGAAGGAACCGTGCAAAGTAATAATCTATTCAGACTCTGCTTATATTGTAAATGCTGTCAATCAAAAT
TGGATAGAAAAATGGCAGAAAAATGGATGGAAGACATCTGAAAAGGAAGAGGTCAAAAACATTGATTTGTGGAATGAACT
TATAGAACTTCTGAAAATTCACAAAGTAACTTTTGAGAAAGTTAAGGGTCACGCTGACAATGAACTTAACAATCTTTGTG
ATAGAATTGCAAGAAGTATGATAAAAGGGGAGCAATAA

Protein sequence :
MKEVTIYTDGACSGNPGPGGWCAILIYKGIRKVLKGFERYTTNNRMELKAVVEALKALKEPCKVIIYSDSAYIVNAVNQN
WIEKWQKNGWKTSEKEEVKNIDLWNELIELLKIHKVTFEKVKGHADNELNNLCDRIARSMIKGEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 3e-26 44