Gene Information

Name : Calhy_0922 (Calhy_0922)
Accession : YP_003992020.1
Strain : Caldicellulosiruptor hydrothermalis 108
Genome accession: NC_014652
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 956374 - 958863 bp
Length : 2490 bp
Strand : +
Note : KEGG: ate:Athe_1825 ATPase AAA-2 domain protein; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGTTTCAAGGAAGGTTTACAGAGAGAGCTGAGAAAGCAATAATGCTTGCGCAGCAGGCTGCTGCTGAGCTTGGCCATAA
CTATGTTGGAACAGAACATTTGCTTTTGGGACTTATAAGAGAAGGTGGTGGCATTGCTGCAAGGGTTTTACACAGCCAAG
GTGTCACTGAAGAAAAGGTGATTGATGAGATTGAAGAACTGATTGGACGGGGTGATTATCAGCTTCCACAGCCACCAACA
GGTTTTACGCCAAGGACAAAAAGAGTGTTTGAGATTGCCTTTATGGAAGCGCGAAGACTTGGCAGCAGCTATATCAGCAC
AGAACATATCCTTCTTGCTATAATGAGAGAAGGAGAAAGTGTAGCTGTGAGGATTTTAATGGACCTTGGTGTTGACCCGC
AGAGACTTTTTGAAGAGATAATGAAGCTTTTGAACGAGGATGCAAAAAATGTTGGTGGTGTATCTCCTCAGCAGCAGATC
AATTTCCAAACACAGAACACTCCAACATTAAATCAGTTTAGCAGAGACCTCACCCAGCTTGCGCTCGAGGGCAAAATTGA
CCCTGTAATTGGCCGTGAAAAGGAAATAGAAAGAGTCATCCAGATTTTGTCAAGAAGAACAAAGAACAACCCGTGCTTGA
TTGGTGAGCCAGGTGTTGGTAAGACTGCTATTGTTGAAGGGCTTGCACAGAAGATTGTAGAAGGAAATGTTCCTGAACTT
TTGAGGAATAAAAGGGTTGTGGCTTTAGACCTTTCTGCTATGGTTGCAGGGTCAAAGTTCAGAGGAGAGTTTGAAGAAAG
GCTCAAAAAAGCTATGGAAGAGGTTAGAAAAGCAGGAAATGTAATTCTGTTTATTGATGAGATGCACACCATAATTGGTG
CTGGTGCAGCCGAAGGTGCAATTGATGCGTCAAACATCTTAAAACCTGCTCTTGCACGCGGTGAGATACAGGTCATTGGT
GCAACAACTCTTGATGAGTACAGAAAACACATAGAAAAGGACGCTGCACTGGAGCGAAGATTCCAACCAATTTTGGTTGG
TGAGCCAACACCTGAAGAGGCTATACAGATTTTAAAAGGTCTTAGAGACAAATACGAAGCTCATCATGGCGTAAAGATAA
CTGATGAGGCTATAAAAGCTGCTGTTGAGCTGTCTACGAAATATATTACAGATAGATACTTGCCGGACAAAGCAATTGAC
CTTATTGATGAGGCAGCATCAAGAGTGAGACTCAGAATGTACACTTTGCCACCGCATGTGAAGGAGTTTGAAGAGAAGAT
TGAAAAGCTTGAAAAGGAAAAGGAAGAGGCTATAAGGCTTCAGGAGTATGAAAAAGCTGCAAAGATAAGAGATGAGATAA
TGAAGCTTCGCCAGGAACTTGAAAAGATAAAAAATTCATGGACAAATGATCAGCAAAAGACACAGCCAATTGTTACAGAA
GATGATATAGCATACATTGTATCAAGCTGGACAGGGATTCCGGTAAATAAACTTACCGAAGATGAGTCTGAAAGACTTTT
AAAGCTTGAAGAGGTTTTGCACAGAAGAGTTGTTGGTCAGGATGAGGCTGTCAAGGCTGTTGCAAGGGCTATACGACGAG
GGAGAGTTGGTCTCAAAGACCCGAAAAGACCAATTGGTTCGTTTATCTTCCTTGGACCTACTGGTGTTGGTAAGACAGAG
CTTGCAAGGGCTTTGGCAGAAGCACTGTTTGGTACAGAAGATGCTATGATAAGAATCGACATGTCGGAGTATATGGAAAA
GTTCAACGTGTCAAAGCTCATTGGTTCGCCTCCAGGCTATGTTGGGTATGAAGAAGGTGGCCAGCTTACCGAAAAGGTCA
GAAGAAGACCTTACTCTGTTGTGCTGTTTGATGAAATAGAAAAAGCGCATCCTGATGTTTTCAACCTGCTTTTGCAGATA
CTTGACGATGGAAGGCTCACAGACTCGCAGGGAAGAACGGTTAGCTTCCGAAACACTGTTATCATTATGACATCTAACAT
TGGTGCAAACCTCATTACAAACCCCAAAAAGTTAGGTTTTTCAACTTCAGAAGATGAAAAGCAAAGGACATATGAACAGA
TAAAAGAAAATGTCATGGGTGAGCTTAAGAAAACTTTCAGGCCAGAGTTTTTGAACAGAATTGATGAAATCATAGTCTTC
CATCCGCTTGATGAAGATGATGTCAAAAAGATTGTAGAGATAATGCTCAAAAACTTGCAGGAGAGGATAAAAGCAAGCGA
GTACTATGCAGAGTTTACTACCTCCTTGGTTGAAGCAATTGCTAAAAAAGGATTTGACCCTGTGTTCGGTGCAAGACCGC
TAAAACGAGCTATCCAGAGCATGGTAGAAGACAAGATTTCAGAGGCTATCTTGGAAGGGAAGATAAAACAGGGCGATGAG
TTTATAGTAGACTATGTTGATGGAAATACAGTAATAGTCAAAAAAGAAAAGGCATCTACATCTTCATCTGAAATGGCTCA
GTCACAGTAA

Protein sequence :
MFQGRFTERAEKAIMLAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLHSQGVTEEKVIDEIEELIGRGDYQLPQPPT
GFTPRTKRVFEIAFMEARRLGSSYISTEHILLAIMREGESVAVRILMDLGVDPQRLFEEIMKLLNEDAKNVGGVSPQQQI
NFQTQNTPTLNQFSRDLTQLALEGKIDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGKTAIVEGLAQKIVEGNVPEL
LRNKRVVALDLSAMVAGSKFRGEFEERLKKAMEEVRKAGNVILFIDEMHTIIGAGAAEGAIDASNILKPALARGEIQVIG
ATTLDEYRKHIEKDAALERRFQPILVGEPTPEEAIQILKGLRDKYEAHHGVKITDEAIKAAVELSTKYITDRYLPDKAID
LIDEAASRVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRLQEYEKAAKIRDEIMKLRQELEKIKNSWTNDQQKTQPIVTE
DDIAYIVSSWTGIPVNKLTEDESERLLKLEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPTGVGKTE
LARALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQI
LDDGRLTDSQGRTVSFRNTVIIMTSNIGANLITNPKKLGFSTSEDEKQRTYEQIKENVMGELKKTFRPEFLNRIDEIIVF
HPLDEDDVKKIVEIMLKNLQERIKASEYYAEFTTSLVEAIAKKGFDPVFGARPLKRAIQSMVEDKISEAILEGKIKQGDE
FIVDYVDGNTVIVKKEKASTSSSEMAQSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 55
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-94 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calhy_0922 YP_003992020.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 61
Calhy_0922 YP_003992020.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 6e-152 53