Gene Information

Name : Halsa_0990 (Halsa_0990)
Accession : YP_003994788.1
Strain : Halanaerobium hydrogeniformans sapolanicus
Genome accession: NC_014654
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1124594 - 1124899 bp
Length : 306 bp
Strand : +
Note : PFAM: microcompartments protein; KEGG: tjr:TherJR_0624 microcompartments protein

DNA sequence : 
ATGAGTGGTGAAGCTTTAGGTTTGATTGAAACTAAAGGTTTTGTTGGAGCAATTGAAGCTGCAGATGCTATGGTTAAAGC
AGCAAATGTTAGTCTGGTAGGATATGAAAAGATAGGTTCTGGACTAATTACCGTTATGGTAAAAGGTGATGTTGGAGCTA
CAAAAGCTGCTACAGATGCTGGTGCAGCTGCTGCAGGTAGAGTAGGAGAACTAATCTCCGTTCACGTAATTCCAAGACCA
CATACCGATGTTGACGCTATTTTACCACAAATGGCTAAAGATAAATTAGACGAATCACAATTATAA

Protein sequence : 
MSGEALGLIETKGFVGAIEAADAMVKAANVSLVGYEKIGSGLITVMVKGDVGATKAATDAGAAAAGRVGELISVHVIPRP
HTDVDAILPQMAKDKLDESQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 8e-16 66
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-15 64
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-14 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halsa_0990 YP_003994788.1 microcompartments protein VFG1596 Protein 3e-16 66
Halsa_0990 YP_003994788.1 microcompartments protein VFG1597 Protein 1e-15 64
Halsa_0990 YP_003994788.1 microcompartments protein VFG1598 Protein 5e-15 63