Gene Information

Name : Halsa_1004 (Halsa_1004)
Accession : YP_003994802.1
Strain : Halanaerobium hydrogeniformans sapolanicus
Genome accession: NC_014654
Putative virulence/resistance : Virulence
Product : propanediol utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4869
EC number : -
Position : 1135820 - 1136467 bp
Length : 648 bp
Strand : +
Note : PFAM: Propanediol utilization protein; KEGG: ctc:CTC02170 ethanolamine utilization protein

DNA sequence :

ATGTCCAATCCAGAACTCAGACAAAAAATAAAAGAGATAATTGCAGAAATGAATCTAGGCGAAAAAAAAGAAGAAAAAAT
AATTCCCATCGAAGCATCAGGAAGACATGTTCATTTAAGTAGAGAAGATGTTGACCGCCTATTTGCAGAGGGTTATGAGC
TAACTCCTAAAAGAGAGCTTTCTCAACCGGGACAGTATTTAGCTGAAGAAAAGATAAGATTAATTGGGCCCAAAGGAATT
ATCGAAAGAGCTGCTATTTTGGGACCTGCCCGCTCAGATACTCAGGTAGAACTTTCAAGAACAGATGCCGTAAAATTAGG
TATAGATCCACCTTTAAGATTTTCAGGTAATGTAGAGGGTAGTGCTTCTATCTTTTTAGGCTCTGCAAAAGATATAGTTA
AACTTGAAGAAGGAGTAATAATAGCTAAAAATCATATACATATGCAGCCTCAGGATGCCGAAAGACTTGGAGTAGAAGAT
GGAGAAAAGGTCAATGTAGAGGCTATGACCGAAAGACCCATTATCTTTAAGAATGTTTTGATCAGGGTTAATGAAGCTTA
CAGGTTAAGCATGCATATCGATTATGATGAGGCAAATGCCTGTATGCACAAGCCTGGAGATAAGGGAAAAATTATAAAAT
TAGATTAA

Protein sequence :

MSNPELRQKIKEIIAEMNLGEKKEEKIIPIEASGRHVHLSREDVDRLFAEGYELTPKRELSQPGQYLAEEKIRLIGPKGI
IERAAILGPARSDTQVELSRTDAVKLGIDPPLRFSGNVEGSASIFLGSAKDIVKLEEGVIIAKNHIHMQPQDAERLGVED
GEKVNVEAMTERPIIFKNVLIRVNEAYRLSMHIDYDEANACMHKPGDKGKIIKLD

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	CAD42070.1	hypothetical protein	Not tested	PAI II 536	Protein	3e-37	46

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Halsa_1004	YP_003994802.1	propanediol utilization protein	VFG1589	Protein	2e-37	46