Gene Information

Name : Halsa_1778 (Halsa_1778)
Accession : YP_003995551.1
Strain : Halanaerobium hydrogeniformans sapolanicus
Genome accession: NC_014654
Putative virulence/resistance : Unknown
Product : cold-shock protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1984946 - 1985149 bp
Length : 204 bp
Strand : -
Note : KEGG: hor:Hore_05400 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGGTTTACACAGGTAAAGTAAAATGGTTTGATGAGAAAAAAGGTTATGGGTTTATTGAAAGAGAAGATGGAGATGATGT
ATTTGTACATTTTTCTGCCATTGAACAGGAAGGCTTTAAAACTTTGAGTGAAGATCAAGAGGTAGAATTTGAAATTGTTG
AAGGAGACCGTGGTCCTCAGGCAGAAAATGTTGTTGTTATATAG

Protein sequence :
MVYTGKVKWFDEKKGYGFIEREDGDDVFVHFSAIEQEGFKTLSEDQEVEFEIVEGDRGPQAENVVVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-14 59
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 0.002 46