Gene Information

Name : Lbys_1198 (Lbys_1198)
Accession : YP_003997271.1
Strain : Leadbetterella byssophila DSM 17132
Genome accession: NC_014655
Putative virulence/resistance : Unknown
Product : transketolase central region
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 1239514 - 1240470 bp
Length : 957 bp
Strand : +
Note : COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475:IPR005476; KEGG: phe:Phep_0873 transketolase central region; PFAM: Transketolase central region; Transketolase domaiN-containing protein; SPTR: Transketolase central region; PFAM: Transket

DNA sequence :
ATGAAGAAATATACATATACGGAATCAAAAGACACACGTTCAGGCTTTGGTGATGCCATGACTGAACTGGGACAGTCCCA
CCCGAACGTTGTAGCCCTTTGTGCCGACTTAGTGGGTTCACTGAAGTTGGACAACTTCATAAAAAATCATCCGGAAAGAT
TCTTTCAAACCGGTATTGCAGAAGCTAATATGATAGGTATAGCCGCGGGTCTATCTATTACAGGAAAAGTTCCCTATGCT
ACCACCTTTGCCAACTTCGGATCTGGTAGAGTTTATGACCAAATTCGGCAGTCGGTAGCTTACTCTGACAAAAACGTAAA
GATCGCCGTATCTCACGCCGGTTTAACGCTAGGAGAAGACGGAGCTACACACCAAATCTTGGAAGATTTGGCTATGATGC
GCTCCATGCCTAATATGGTGGTTATTAATCCTTGTGATTATAACCAAACAAAAGCCGCTACGAAAGCCATTGCAGATTAT
CACGGTCCGGTATACTTGAGATTTGGTAGACCAGTGGTTCCTGTATTCACTCCTGCTGATCAAAAATTTGAAATCGGTAA
GGCATGGATGGTGAACGAAGGTAAAGATGTTACCATCATTGCCACAGGGCACTTGGTTTGGGAAGCCATTCAAGCCGGAG
AAAAATTAGAGGAACTAGGCATATCTGCAGAGATCATCAATATACATACCATTAAGCCTCTTGATACAGCGGCAATCCTG
AAATCTGTAAAGAAAACCGGATGTGTAGTAACTTGTGAAGAACATCAGGCTAATGGAGGACTTGGAGATGCCGTAGCTCA
ATTCCTAACTACTGAATACTTAGTACCGCAAGAATACATTGCCGTTAAAGACTCCTTTGGTGAATCAGGAACTCCTGACC
AACTGATGGCCAAATACGGCTTGAAAGCAGACAATATTGTTGCTGCAGCACAAAAAGTAATCAGCAGAAAGAAATAA

Protein sequence :
MKKYTYTESKDTRSGFGDAMTELGQSHPNVVALCADLVGSLKLDNFIKNHPERFFQTGIAEANMIGIAAGLSITGKVPYA
TTFANFGSGRVYDQIRQSVAYSDKNVKIAVSHAGLTLGEDGATHQILEDLAMMRSMPNMVVINPCDYNQTKAATKAIADY
HGPVYLRFGRPVVPVFTPADQKFEIGKAWMVNEGKDVTIIATGHLVWEAIQAGEKLEELGISAEIINIHTIKPLDTAAIL
KSVKKTGCVVTCEEHQANGGLGDAVAQFLTTEYLVPQEYIAVKDSFGESGTPDQLMAKYGLKADNIVAAAQKVISRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 5e-44 44
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 7e-38 42
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 2e-46 41
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 2e-46 41