Gene Information

Name : Lbys_2493 (Lbys_2493)
Accession : YP_003998510.1
Strain : Leadbetterella byssophila DSM 17132
Genome accession: NC_014655
Putative virulence/resistance : Virulence
Product : ABC transporter related protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2741218 - 2741973 bp
Length : 756 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR017911:IPR017871:IPR003593; KEGG: dfe:Dfer_3760 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ATP-binding protein of A

DNA sequence : 
TTGAAAAATGAACAATTGGGCAGTATGACCATTATTGAAACCAAAGACATCACGAAGAGATATATCATGGGAGCAGAAGT
AGTAGATGCCCTAAAAGGAGTATCTATTACGATCAAAAAAGGAGAATACGTGGCCTTCATGGGTCCATCCGGCTCCGGGA
AATCTACTTTGATGAATATCATAGGGTGTTTAGACTCCCCTACCAGCGGAACCTACATTCTGAACCAAAAGGATGTGAGT
GACATGAGCGAAAATGAATTAGCTGAAGTGAGAAACAAGGAGATCGGATTCGTATTCCAGACCTTTAACCTTTTGCCTCG
CCAATCCTCCCTGGAAAATGTGGCGCTACCCTTGATCTATGCGGGATATAACAAGGCGGATCGCTCAGAAAAAGCACAGA
AAGTGCTGGAAAGTGTGGGCCTAGGTACCAGAAGCAATCATAAACCCAATGAACTTTCCGGTGGCCAGCGTCAGAGGGTA
GCCGTAGCACGCGCACTGGTGAATGATCCTTCTATCCTTTTGGCCGATGAACCTACAGGTAACCTAGATACCCGTACGTC
TTATGAGATCATGCAGCTATTTGCCGAGATTCATTCAAAAGGAAATACCATCATCATGGTTACGCACGAAGAAGATATAG
CCAGATATGCGCATAGGATCATCCGACTAAGAGACGGTCTCATTGAAACGGATGAAATCAATCCTAGTCCAACGGATCCC
GTAGAAATGGCCAAGCAGCTAGCAGAGAAAAAATAA

Protein sequence : 
MKNEQLGSMTIIETKDITKRYIMGAEVVDALKGVSITIKKGEYVAFMGPSGSGKSTLMNIIGCLDSPTSGTYILNQKDVS
DMSENELAEVRNKEIGFVFQTFNLLPRQSSLENVALPLIYAGYNKADRSEKAQKVLESVGLGTRSNHKPNELSGGQRQRV
AVARALVNDPSILLADEPTGNLDTRTSYEIMQLFAEIHSKGNTIIMVTHEEDIARYAHRIIRLRDGLIETDEINPSPTDP
VEMAKQLAEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-32 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lbys_2493 YP_003998510.1 ABC transporter related protein NC_012469.1.7686878. Protein 2e-59 56
Lbys_2493 YP_003998510.1 ABC transporter related protein NC_008702.1.4606598. Protein 7e-50 49
Lbys_2493 YP_003998510.1 ABC transporter related protein CP001581.1.gene598.p Protein 2e-45 47
Lbys_2493 YP_003998510.1 ABC transporter related protein CP001581.1.gene798.p Protein 4e-42 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lbys_2493 YP_003998510.1 ABC transporter related protein VFG0869 Protein 5e-24 41