Gene Information

Name : Lbys_0498 (Lbys_0498)
Accession : YP_003996625.1
Strain : Leadbetterella byssophila DSM 17132
Genome accession: NC_014655
Putative virulence/resistance : Resistance
Product : ABC transporter related protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 538064 - 538741 bp
Length : 678 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: zpr:ZPR_4631 ABC-type transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative ABC trans

DNA sequence :
ATGATCAAGATTAAAAACCTAGAAAAATACTACCGTACAGAAGAGGTAGAAACCATAGCCTTAAACAAATTAAATCTTAA
AGTGGAACCGGGAGAATTTGTGGCCATCATGGGACCAAGCGGTTGCGGGAAATCTACCCTCTTAAACATCCTGGGACTAT
TGGATGATCCGGATGGAGGAGAATTCATCTTCAACGGAACAGATGTCACTCATTTTAACGAAAAGAAGAGAGCCGAACTA
AGGAAGCAAACCCTAGGTTTTGTTTTCCAAAGTTTTAACCTTATTGATGAATTAACGGTGTTCGAAAATGTGGAACTCCC
TCTGATTTACTTGAAAATAGGAGCTTCAGAACGTAAGAAACGTGTAGAAGAGGTTTTGGAAAAAATGCAGATCATGCACA
GAAGAAATCACTTCCCTCAACAATTGTCCGGAGGACAACAGCAAAGAGTAGCCTTTGCCCGTGCCGTAGTTCACTCCCCG
AAACTAATTCTTGCTGATGAGCCTACAGGTAACTTGGATAGTAATAACGGAAATGAAGTAATGCAGCTATTAAGTGACCT
TAACGCTTCAGGCACTACGGTCATCATGGTTACACACAGTGAACATGACGCGCGCTATAGCCACAGAATCATTAGAATGT
TAGATGGTCAAACCGTAACCGAAAACATACTGAGATGA

Protein sequence :
MIKIKNLEKYYRTEEVETIALNKLNLKVEPGEFVAIMGPSGCGKSTLLNILGLLDDPDGGEFIFNGTDVTHFNEKKRAEL
RKQTLGFVFQSFNLIDELTVFENVELPLIYLKIGASERKKRVEEVLEKMQIMHRRNHFPQQLSGGQQQRVAFARAVVHSP
KLILADEPTGNLDSNNGNEVMQLLSDLNASGTTVIMVTHSEHDARYSHRIIRMLDGQTVTENILR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-30 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lbys_0498 YP_003996625.1 ABC transporter related protein NC_012469.1.7686878. Protein 4e-48 51
Lbys_0498 YP_003996625.1 ABC transporter related protein NC_008702.1.4606598. Protein 2e-37 47
Lbys_0498 YP_003996625.1 ABC transporter related protein CP001581.1.gene798.p Protein 8e-34 44
Lbys_0498 YP_003996625.1 ABC transporter related protein NC_012469.1.7685735. Protein 1e-34 42
Lbys_0498 YP_003996625.1 ABC transporter related protein NC_012469.1.7686946. Protein 6e-28 41