Gene Information

Name : FraEuI1c_1437 (FraEuI1c_1437)
Accession : YP_004015372.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1790497 - 1791177 bp
Length : 681 bp
Strand : -
Note : KEGG: cai:Caci_1029 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
GTGCTCGAGCTACGTGACGTGCACAAGACCTACCCGAGCACGCCGCCGGTGCCTGCGTTGCGTGGGGTGAGCCTGACGAT
CCTAGAAGGTGAACTAGTGGCCATCGTCGGCCCGTCCGGCTCGGGGAAGACAACCCTGTTGCACATGATGGGCACGCTGG
ACCGGCCCAGCTCCGGCACGGTACGCCTGACCGGCTTCGAGACGTCAGAACTGCCGGACCGCGAGTTGGCCGGCCTGCGC
GCCCAGCGGATCGGCTTCGTGTTCCAACAGTTTTTCCTCGCCGAGCACGCGACCCTGCTGGACAACGTCGCCGACGGTCT
GCTCTACACCGGAATCCCGCACCGGGAACGGTACGAACGCGCCGCCGAGGCGTTGGCCGCCGTGAGACTCGACCACCGGC
TGCACGCCCGCCCCACCCAGCTATCAGGGGGGCAACGGCAGCGCGTCGCCATCGCCCGCGCGGTGGTCGGCAGCCCGGCC
ATCGTCCTGGCCGACGAACCGACAGGCAACCTCGACCACGCCACCGGGCAGGCCATCCTCACGCTGGTCGACGCGCTACA
CCGGGCCGGCACGACGATCGTGATCATCACCCATGACCGCGACGTCGCTGCCAGAATGCCCCGCCAGGTCCACGTCCGGG
ACGGGCAGATCGTCTCCGACACCGCGGCCGGGCGACCATGA

Protein sequence : 
MLELRDVHKTYPSTPPVPALRGVSLTILEGELVAIVGPSGSGKTTLLHMMGTLDRPSSGTVRLTGFETSELPDRELAGLR
AQRIGFVFQQFFLAEHATLLDNVADGLLYTGIPHRERYERAAEALAAVRLDHRLHARPTQLSGGQRQRVAIARAVVGSPA
IVLADEPTGNLDHATGQAILTLVDALHRAGTTIVIITHDRDVAARMPRQVHVRDGQIVSDTAAGRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 9e-32 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FraEuI1c_1437 YP_004015372.1 ABC transporter NC_008702.1.4606598. Protein 9e-35 47
FraEuI1c_1437 YP_004015372.1 ABC transporter NC_012469.1.7686878. Protein 2e-45 47
FraEuI1c_1437 YP_004015372.1 ABC transporter CP001581.1.gene798.p Protein 2e-32 42
FraEuI1c_1437 YP_004015372.1 ABC transporter CP001581.1.gene598.p Protein 7e-32 41