Gene Information

Name : Calkro_0598 (Calkro_0598)
Accession : YP_004023311.1
Strain : Caldicellulosiruptor kronotskyensis 2002
Genome accession: NC_014720
Putative virulence/resistance : Unknown
Product : transketolase central region
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 744165 - 745106 bp
Length : 942 bp
Strand : +
Note : PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: ate:Athe_2059 transketolase central region

DNA sequence :
ATGGCAAAGATAGCAACAAGAGAAGCGTATGGTCAAGCACTGGCTGAGTTTGGTGAAGTATACAAAGACATTGTTGTACT
TGATGCAGACCTTTCAAAATCAACAAGGACAGAGATTTTCAAAAAGAAATTTCCTGAAAGGTTTTTCAATATAGGAATTG
CAGAACAGGACCTTATGGCAACAGCAGCAGGACTTGCAACATGTGGCAAGATTCCGTTTGCAAGCACATTTGCAATCTTT
GCCGCTGGAAGAGCTTATGACCAAGTGAGAAACTCAATAGGTTATCCGCATTTAAATGTTAAAATCGGTGCATCTCACGC
TGGTGTGTCAATAGGTGAAGATGGTGCATCTCATCAGATGCTTGAAGATATAGCATTGATGAGAGTAATCCCTGGAATGG
TTGTGCTTTCTCCTTCTGATGCCGCATCCACTTATGAGTGTGTAAGACTTGCAATTGAGCATGAAGGACCTGTTTATATT
CGCTTGGGAAGACTTGGGGTTGAGGAGATTTACAAGAAAGGTGAACTAAAACTTGAGCTTGGCAAAGGCATTGTTCTTCA
AAAAGGGACAGATGTTGGAATTTTAGCAACAGGGTTAATGGTTCATGAAGCAATAAAGGCTGCAAAAATGCTGCAGGATG
AGGGATTTTCAGTATATCTTGTTGACATGCCGTGCATAAAACCAATTGACATTGATTTAATTTTAGATGTTGCAAAAGTC
ACTGGCTGTATTGTTACAGCAGAAGAGCACAATATCTTAGGTGGTTTTGGAAGTGCTGTTTCTGAGGTTTTGATTCAAAA
CTATCCTGTACCGGTAAAAATGGTTGGAGTAAATGACGAGTTTGGAAGGTCAGGAAAACCTGAAGATGTTTTGAAATATT
ATAAACTCACTGCTGATGAGATAGTAAATAAAGCAAAAGAGGTTATGAAGATGAAAAAGTAA

Protein sequence :
MAKIATREAYGQALAEFGEVYKDIVVLDADLSKSTRTEIFKKKFPERFFNIGIAEQDLMATAAGLATCGKIPFASTFAIF
AAGRAYDQVRNSIGYPHLNVKIGASHAGVSIGEDGASHQMLEDIALMRVIPGMVVLSPSDAASTYECVRLAIEHEGPVYI
RLGRLGVEEIYKKGELKLELGKGIVLQKGTDVGILATGLMVHEAIKAAKMLQDEGFSVYLVDMPCIKPIDIDLILDVAKV
TGCIVTAEEHNILGGFGSAVSEVLIQNYPVPVKMVGVNDEFGRSGKPEDVLKYYKLTADEIVNKAKEVMKMKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 2e-36 43
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 6e-30 42