Gene Information

Name : Calkr_0505 (Calkr_0505)
Accession : YP_004025666.1
Strain : Caldicellulosiruptor kristjanssonii 177R1B
Genome accession: NC_014721
Putative virulence/resistance : Unknown
Product : transketolase central region
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 547582 - 548523 bp
Length : 942 bp
Strand : +
Note : PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: csc:Csac_1352 transketolase, central region

DNA sequence : 
ATGGCAAAGATAGCGACAAGAGAAGCATATGGTCAGGCATTGGCTGAGTTTGGTGAAGTATACAAAGACATTGTTGTGCT
TGATGCTGACCTTTCAAAATCAACAAGGACAGAGATTTTCAAAAAGAAATTTCCTGACAGGTTTTTCAATATAGGAATTG
CAGAACAGGACCTTATGGCAACAGCAGCAGGACTTGCAACATGCGGCAAGATTCCGTTTGCAAGCACATTTGCAATCTTT
GCCGCTGGAAGAGCTTATGACCAGGTAAGAAACTCAATAGGTTATCCACATCTAAATGTCAAGATTGGAGCATCACATGC
AGGTGTATCAATCGGCGAAGATGGAGCATCGCATCAGATGCTTGAAGATATAGCTTTGATGAGAGTAATCCCTGGGATGG
TGGTGCTTTCTCCTTCTGATGCAGCATCCACTTATGAGTGTGTAAGACTTGCAATTGAGCATGAAGGCCCTGTTTATATT
CGTCTGGGCAGACTCGGTGTTGATGAGATTTACAAAAAAGGAGAGCTAAAGCTCACTCTTGGCAAAGGCATTGTTCTTCA
AAAAGGTACAGATGTTGGAATTTTGGCAACAGGGCTGATGGTCCATGAAGCTATAAAGGCTGCAAAAATGTTACAGGATG
AGGGAATTTCAGTATATCTTGTTGACATGCCGTGCATAAAACCAATTGATGTTGATTTGATTTTAGATGTTGCAAAAGAG
ACTGGCTGCATTGTCACAGCAGAAGAGCACAATGTGCTGGGTGGTTTTGGAAGTGCTGTTTCTGAGGTTTTAATTCAAAA
CTATCCTGTACCGGTAAAAATGGTTGGTATAAATGATGAGTTTGGAAGATCAGGTAAGCCTGAAGATGTTCTAAAATACT
ATAAGCTTACAGCAGAGGAGATTGTAAATAAAGCAAAAGAGGTTATGAAGATGAAAAAATAA

Protein sequence : 
MAKIATREAYGQALAEFGEVYKDIVVLDADLSKSTRTEIFKKKFPDRFFNIGIAEQDLMATAAGLATCGKIPFASTFAIF
AAGRAYDQVRNSIGYPHLNVKIGASHAGVSIGEDGASHQMLEDIALMRVIPGMVVLSPSDAASTYECVRLAIEHEGPVYI
RLGRLGVDEIYKKGELKLTLGKGIVLQKGTDVGILATGLMVHEAIKAAKMLQDEGISVYLVDMPCIKPIDVDLILDVAKE
TGCIVTAEEHNVLGGFGSAVSEVLIQNYPVPVKMVGINDEFGRSGKPEDVLKYYKLTAEEIVNKAKEVMKMKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 4e-37 42
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 2e-30 41