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Name : RBRH_01676 (RBRH_01676) Accession : YP_004028079.1 Strain : Burkholderia rhizoxinica HKI 454 Genome accession: NC_014722 Putative virulence/resistance : Unknown Product : protein translocase subunit secD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 387400 - 389457 bp Length : 2058 bp Strand : + Note : - DNA sequence : ATGAATCGCTATCCCCTCTGGAAATACGTCGTGATGTTGGTGGCGCTTGCCATCGGCTTGCTGTACACGCTACCCAACTT CTTCGGCGAGGCGCCGGCGGTGCAGGTGTCCAGCGGCAAGGCGACGGTCAAGCTGGACTCGTCGGTGCTCAATACCGTCG AGTCGACGCTCGCCGCGAACGGCGTGCAGGCGGACGACGTGACGTTCGACAACGCGAGTCAAAACGCGAATATCCGCGTG CGCCTGAAGGACACCGACACGCAACTGCGCGTGAAGGACCTACTGCAAAAGGCGCTCAATGCCGATCCGGCGGATCCGAC TTATATCGTCGCGCTGAACCTGCAATCGGCGTCGCCGCGCTGGCTAGCGTCGCTGCACGCGCTGCCGATGTACCTGGGGC TGGACCTGCGTGGCGGCGTGCACTTCCTGCTGCAGGTGGATTTGGCCGGTGCGCTGAATAAGAAACTCGATGCGGACGCA GCTGATGCGCGTACGCTACTGCGCGACAAGTCGATCCGCGCTGGCGGCGTGAACCGCGTGGGCCAGACAGTGGTGGTCAA CTTCGTTGATCAGGACGTCGCGAACCGCGCGCGCCAGTTGCTGTCGGACAACGTCACTGAGTTGACCTGGCAAGTACAGC CGGCCGCCGGCGGCTATCAGGTGGTGGGCGCATTTACACCAGCCGCGCAAAAAACGGTGCAGGACAGCGCGCTGAAGCAA AACATCACAACGCTGCACAACCGAGTCAACGAGCTTGGCGTCGCCGAGCCGATCGTGCAGCAACAGGGCGCGGACCGGAT CGTTGTTGAACTGCCCGGTGTGCAGGACACCGCAAAGGCCAAGGACATCATCGGGCGGACCGCGACGCTCGAGGCTCGCA TGGCCGATTATCAGAATCCGGTGCGCAACATCAACGACCCGGTGCCGGTCGGTGATGACCTGTTCACGCAGGGCAACGGC GCGCCGGTGTACCTGAAGAAACAAGTGATCTTCACCGGTGACCGGATCACCGACGCGTCGGCCGGTTTCGACGAGCACCA GCGTCCGGCCGTGAAGATCCGCCTCGATGCGCGCGGCGGACGGGTGCTGCGCGACGTGTCGCGCGACAACATCGGCAAGC CGATGGCGATCGTGCTGTTCGAGAAGAACAAGGGCGAGTTGCTGACGGTGGCGACGATCCAGTCCGAGCTGGGCGAAAAC TTCCAAATCACCGGCCAGCCGACGCCCCAGGCGGCGACCGATCTCGCGCTGTTGCTGCGCGCCGGTTCGCTGGCCGCGCC GATGGAGATCATCGAGGAGCGCACGATTGGACCGAGCCTGGGCGCGGACAACATTAGAAAGGGTTTCGACTCGGTGCAGT ACGGGTTCGCTGCGATTGCGGTGTTCATGATCGCGTACTACATGCTGTTCGGACTGATCTCGGTGATTGCGTTGTCGGTG AACCTGCTGCTGCTCGTCGCGGTGCTGTCGATGATGCAGGCGACGCTGACATTGCCCGGCATCGCGGCGATCGCGCTGGC ACTGGGCATGGCGATCGACGCGAACGTGCTGATCAACGAGCGCATTCGCGAGGAGCTGCGTCGCGGCGCGCCTGCGCAAC TGGCGATCCAGAATGGCTTCTCGCATGCATGGGCGACGATCCTGGATTCGAATGTCACGACGCTGATTGCCGGGCTGGCG CTACTTGCGTTCGGCTCCGGGCCGGTGCGCGGCTTTGCGGTCGTGCACTGCATCGGCATCCTGACATCGATGTTCTCCGC CGTGTTCTTCGCACGGGGGCTGGTGAACCTGTGGTACGGCGGCAAGAAGAAGCTCAAGTCGTTGGCCATTGGCCAGGTAT GGCGTCCGGAAGGCACGCTGGCCGCGTACGCCGAATCTGCTCAGCAGGGGGCGGGCGGCGCGGCGCAGGCGCTGCCGCGT ACTTCGGACGCCAAGCGCCCGGGTCCGAAGCGCGCGGTACGGCGCAATGCGCCAGCGGCGCCGCGGCCCGGCGATGCGCC CCCATCGGAGCGCACACCGCAACGTGATGCGCCGACCAAGCCGGGCCAGTCCCGCTGA Protein sequence : MNRYPLWKYVVMLVALAIGLLYTLPNFFGEAPAVQVSSGKATVKLDSSVLNTVESTLAANGVQADDVTFDNASQNANIRV RLKDTDTQLRVKDLLQKALNADPADPTYIVALNLQSASPRWLASLHALPMYLGLDLRGGVHFLLQVDLAGALNKKLDADA ADARTLLRDKSIRAGGVNRVGQTVVVNFVDQDVANRARQLLSDNVTELTWQVQPAAGGYQVVGAFTPAAQKTVQDSALKQ NITTLHNRVNELGVAEPIVQQQGADRIVVELPGVQDTAKAKDIIGRTATLEARMADYQNPVRNINDPVPVGDDLFTQGNG APVYLKKQVIFTGDRITDASAGFDEHQRPAVKIRLDARGGRVLRDVSRDNIGKPMAIVLFEKNKGELLTVATIQSELGEN FQITGQPTPQAATDLALLLRAGSLAAPMEIIEERTIGPSLGADNIRKGFDSVQYGFAAIAVFMIAYYMLFGLISVIALSV NLLLLVAVLSMMQATLTLPGIAAIALALGMAIDANVLINERIREELRRGAPAQLAIQNGFSHAWATILDSNVTTLIAGLA LLAFGSGPVRGFAVVHCIGILTSMFSAVFFARGLVNLWYGGKKKLKSLAIGQVWRPEGTLAAYAESAQQGAGGAAQALPR TSDAKRPGPKRAVRRNAPAAPRPGDAPPSERTPQRDAPTKPGQSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-83 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-83 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-83 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-83 | 43 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-83 | 43 |
