Gene Information

Name : LA2_09430 (LA2_09430)
Accession : YP_004032588.1
Strain : Lactobacillus amylovorus GRL 1112
Genome accession: NC_014724
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1803737 - 1804486 bp
Length : 750 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAATGAAATTCTTGTGGTGGACAATATCACCAAGACTTACGGGAAAAAAAGCGAAAAACAATACCAAGCTTTGAAAGG
CATCAACTTCAAGGTCACCTCAGGCGAATTCGTCGCAATCATGGGTGCTTCAGGCTCTGGTAAGACTACCTTGTTAAACA
TTCTTTCAACGCTTGATAAGCCAACTACCGGCCAAGTTTTTATCAACGGTAAAGACATCAGCAATTTAAATGCCAACCAA
ATGGCTGACTTCCGTAGTAAGGAAATTGGATTTATCTTCCAAGACTTCAACTTATTGGAAAATTTGACCAACCGTGAAAA
TATTGCGTTGCCACTCAGCTTGCGTGGTATTTCAACTAATCGCATTAATCCACTTGTGGATAAAATTGCAGCTAAGTTGG
GGATTAAAGAAATTTTGGACAAATATCCAGCTGAAATTTCTGGTGGTCAAAAGCAGCGTGTTGCTTCAGCTCGCGCACTT
GTTCACGAACCAGCCATGCTGTTAGCCGATGAACCAACCGGTGCGCTGGACTCTAAGAGTGCCCGTGAACTTTTAAATAC
AATGGAAAACTTAAACAAAAACGATGGCGTAACTACTTTGATGGTTACCCACGATCCATTTTCCGCCAGCTTTGCCAACC
GCATTTTATTTATCAAAGACGGTAAGATCGGTGAGCAAATGGTAAAGGGTAACAAGAGCAGAACTGATTTCTACCATGAA
TTAATTGCTCACTTAGGAACCGAAGAATAG

Protein sequence : 
MNEILVVDNITKTYGKKSEKQYQALKGINFKVTSGEFVAIMGASGSGKTTLLNILSTLDKPTTGQVFINGKDISNLNANQ
MADFRSKEIGFIFQDFNLLENLTNRENIALPLSLRGISTNRINPLVDKIAAKLGIKEILDKYPAEISGGQKQRVASARAL
VHEPAMLLADEPTGALDSKSARELLNTMENLNKNDGVTTLMVTHDPFSASFANRILFIKDGKIGEQMVKGNKSRTDFYHE
LIAHLGTEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LA2_09430 YP_004032588.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 7e-40 44
LA2_09430 YP_004032588.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-47 44
LA2_09430 YP_004032588.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-39 43
LA2_09430 YP_004032588.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 8e-37 43