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Name : secD (MPQ_2187) Accession : YP_004040571.1 Strain : Methylovorus sp. MP688 Genome accession: NC_014733 Putative virulence/resistance : Unknown Product : protein-export membrane protein secd Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2252749 - 2254545 bp Length : 1797 bp Strand : + Note : - DNA sequence : GTGCTGATCACCCTGGTGCTCGGCGTGGTGTATTCGCTGCCCAATCTGTTTGGTGAGTCACCAGCCGTCCAGGTATCCAC CGCCAAGAGCTCCGCGAAACTCGACCCGGCATTGCTGGGCCAGGTGGAAGATATCCTGAAGCAGGAAAAAATCACTTATG AAGCGGTGTTTCTTGACACGAATGGCGTCAAGGTACGATTTGAAAATGCGGACACGCAAATCAATGCCAAGGATGTGCTG CAAGGCAAGCTGGGCAAGGATTACGTCGTTGCACTCAATCTGATCTCGCGTTCACCTTCTTGGCTGCGCAGCATCGGCGC GCTGCCCATGTATCTGGGTCTGGACTTGCGCGGCGGCGTTCACTTCCTGCTGCAAGTTGACATGAAAGCCGCGCTGGATA AGGCCGCTGAGCGTTATGTCGGCGATTTCCGCAGTGCGTTGCGCAAGGAGCGCGTGGCTTACATGGGCGTCAGCCGTGAA GGCCAGGCCGTGCAGGTGCGCTTCAGCAGCGCTGCCGAACTGGCAAAAGCCCAGAAAATCCTGAACAAGGAATACCCTGA CCTCACCTTCCGCACCCTGGATAGCGGTAACGACAAACTGCTGATCGCCACACTGAATCTGCAGGCACAAAAACGCATTC AGGAATTTGCCCTCAAGCAGAACATTCAAACCCTGCACAATCGCGTGAACGAACTCGGCGTTGCGGAACCGATTATTCAG CAGCAAGGCCTGGATCGCATCGTGATCCAGTTGCCAGGCGTGCAGGACACGGCCAAGGCCAAGGAAATTCTCGGCCGTAC CGCGACGCTTGAAATCCGCATGGTGGACGAAGAGAAGAGCGACATGACCACGCTGGACAAAGCCAGCAAGGGTCAGGTGC CATTTGGTGACGAGTATTATGTGGAACGTAACGGCCAGCCTATTCTGGTGAAAAAGAATGTCGTGCTGACCGGTGACTAC ATCACCGACGCCGGCCCTGGCCTGGATCAGCAAAACGGCGAGTCCGTTGTGCATGTCACCCTGGATGGTCGCGGCGCCCG TATCTTCAAACAGGCCACCAAGGAAAACGTCGGCAAGCGCATGGCGATTCTGCTGATTGAAAAAGGCCAGGCAGAAGTGA TTACTGCTCCTGTCATCCGCGAAGAAATTGGCGGCGGCCGCGTGCAGATTTCCGGCATGGCGAACGTGCAGGAAGCTACC GATGTTTCATTGCTGCTGCGCGCTGGCGCGCTGGCTGCGCCAATGGACATCATCGAAGAACGTACCGTTGGCCCAAGCAT GGGTGAAGAAAACATCAAACGCGGCTGGCACTCGACCCTGTGGGGCTTCGCTGCGATTGCCGTGTTCATGATCATCTACT ACATGCTGTTCGGTAGCGTGTCGGTGCTGGCGCTGGGCGTCAACCTGCTGCTGCTGACCGCCGTGCTGTCGCTGCTGCAG GCCACGCTCACACTGCCCGGTCTGGCGGCGATTGCGCTGACGCTGGGGATGGCGATTGACGCCAACGTGCTGATCAATGA GCGTATTCGTGAAGAGCTGCGCAATGGCAATACGCCTCAGGCTGCCATTCACGCCGGCTATGACCGCGCCTTCGATACCA TTCTGGATTCCAACGTCACCACCATGATCGCCGGCCTCGCCCTGTTCATGTTCGGCTCCGGCCCGGTCAAGGGCTTTGCC GTAGTGCACGTGCTGGGCATTTTGACTTCCATGTTCAGCGCCGTGGTGGTTTCGCGCGCGCTGGTCAACCTGATTTACGG TTACCGCCGCAAGATCAGCAAGCTGTCCATCGGCTGA Protein sequence : MLITLVLGVVYSLPNLFGESPAVQVSTAKSSAKLDPALLGQVEDILKQEKITYEAVFLDTNGVKVRFENADTQINAKDVL QGKLGKDYVVALNLISRSPSWLRSIGALPMYLGLDLRGGVHFLLQVDMKAALDKAAERYVGDFRSALRKERVAYMGVSRE GQAVQVRFSSAAELAKAQKILNKEYPDLTFRTLDSGNDKLLIATLNLQAQKRIQEFALKQNIQTLHNRVNELGVAEPIIQ QQGLDRIVIQLPGVQDTAKAKEILGRTATLEIRMVDEEKSDMTTLDKASKGQVPFGDEYYVERNGQPILVKKNVVLTGDY ITDAGPGLDQQNGESVVHVTLDGRGARIFKQATKENVGKRMAILLIEKGQAEVITAPVIREEIGGGRVQISGMANVQEAT DVSLLLRAGALAAPMDIIEERTVGPSMGEENIKRGWHSTLWGFAAIAVFMIIYYMLFGSVSVLALGVNLLLLTAVLSLLQ ATLTLPGLAAIALTLGMAIDANVLINERIREELRNGNTPQAAIHAGYDRAFDTILDSNVTTMIAGLALFMFGSGPVKGFA VVHVLGILTSMFSAVVVSRALVNLIYGYRRKISKLSIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-92 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-92 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-92 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-92 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-92 | 43 |
