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Name : Calni_0027 (Calni_0027) Accession : YP_004050107.1 Strain : Calditerrivibrio nitroreducens DSM 19672 Genome accession: NC_014758 Putative virulence/resistance : Unknown Product : cold-shock protein Function : - COG functional category : K : Transcription COG ID : COG1278 EC number : - Position : 24950 - 25153 bp Length : 204 bp Strand : + Note : COGs: COG1278 Cold shock protein; InterPro IPR002059: IPR019844: IPR012156: IPR011129; KEGG: ddf:DEFDS_1433 cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: Cold shock protein; PFAM: 'Cold-shock' DNA-binding domai DNA sequence : ATGAGTAACACAGGAACAGTTAAGTGGTTCAACGACACAAAAGGTTATGGTTTTATTACCAGCACAACAGGAGAGGATGT ATTTGTACACTACTCTGCGATTACTATGGGTGGGTTTAAAAGCCTGAAAGAGGGAGACAGGGTAAAATTTGATATCGTAA AAGGTCCAAAAGGTCCGCAAGCAGCTAATGTAAATATGGCTTAA Protein sequence : MSNTGTVKWFNDTKGYGFITSTTGEDVFVHYSAITMGGFKSLKEGDRVKFDIVKGPKGPQAANVNMA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18076.1 | unknown | Not tested | TTSS locus | Protein | 2e-13 | 60 |
| cspH | YP_216241.1 | cold shock protein-like protein | Not tested | SPI-11 | Protein | 0.014 | 42 |
