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Name : Sulku_2270 (Sulku_2270) Accession : YP_004061130.1 Strain : Sulfuricurvum kujiense DSM 16994 Genome accession: NC_014762 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : 2.7.7.6 Position : 2297283 - 2301428 bp Length : 4146 bp Strand : - Note : COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; InterProIPR007121: IPR010243: IPR007644: IPR007642: IPR 007645: IPR019462: IPR007120: IPR007641; KEGG: tdn:Suden_0353 DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb DNA sequence : ATGTTAAACACTCTTCACTCCGGAAACCGCTTACGCGTAGATTTCGCGAAAACTCCCCAGCAAATTGAAGTACCGAATTT GTTACAACTTCAACAAAGTTCTTACGAATCATTTTTGATGTTGGATCAAAAAGATCGTACTAAAAGCGGTATCGAGCGCG TTTTCCAATCGGTATTCCCGATTCATGATTCTCAAAACCGTCTTTCTCTTGAATATCTAGGCTCAGAAGTAGGCCGTCCA AAGTACACCGTACGCGAATGTATGGAACGCGGATTGACCTATTCGGTATCACTGCGTATGAAAACACGCCTTATGATTTG GGACCGTGATGAAAACACCAAAGAAAAAACCGGTGTAAAAGATATCAAAGAACAAACAATCTTTATCCGTGACATCCCTT TGATGACCGATCGTACGTCGTTCGTTATCAACGGTGTCGAGCGTGTCGTTGTTAATCAGCTTCACCGTTCACCGGGGGTT ATCTTCAAAGAAGAAGAATCAACCACTGCCGGAAGCAAAATGATTTTTACCGGTCAGATTATCCCTGACCGCGGTTCATG GCTCTATTTTGAGTACGATCCGAAAGACATCCTTTACATGCGTATCAATAAACGCCGTAAAGTTCCTGTTACGATCATGT TCCGTGCACTCGGATACAGCAAACAAGACATTCTAAAAATGTTCTATCCGTTGCAAAAGATCCGTGTCGAAGAGAATAAA TATTTGATGGATTTCGATCCGGAACAATTTGCGGGACGACTCGGTTATGATCTTATCGACTCTGAGGGCAAACTGCTTGT TGCAGCCGGAAAACGCCTTTCGACTAAAAAAGCGGAGAAATTGATTTCTGAAGGTGTTAAAGCGATCCAGTACCCGATTG AAACATTGATTGAGCGCCATTTGGCTGAACCGATTATTGACGCAGAGACCGGCGAAGTCATGTTTGACACGATGACACAA TTGGATGAGACTAAGCTCAAAAAAATGGTTGAAGCGGGTGTCAAAGAGTTCGTTATCGCGAATGACCTTGCAGAAGGGTA TGACAGCGCTATTATCAATGCATTCATTGCTGATGCCGATTCTTTGAAATTGCTTCGTCAAACCGAAATCATCGAAGATG AAAATGATCTTGCGGCAATCCGTATCTACAAAGTAATGCGCCCGGGTGAACCTGTAACGAAAGAAGCGGCGAAAGTGTTC GTCAATCAATTGTTCTTCGATCCTGAGCGTTATGATTTGACACGCGTCGGCCGTATGAAAATGAATCACAAACTTGGACT TAACATTCCTGAGTATGTAACCGTTTTGACAAATGAAGATATTATTAACACGGTTAAATACGTCGTTAAAGTCAAAAATG GCCAAGGGCATATCGATGACCGTGATCACCTCGGTAACCGACGTATCCGTTCTATCGGTGAACTACTCGGTAACGAGCTT CACAACGGTCTTGTCAAAATGCAAAAAGCGATCAAAGACAAACTGAGCACGATGAGCGGGCCGACCACCGAATTGATGCC GCATGACTTGATTAACTCGAAAATGATTACGTCAACGATCATGGAGTTCTTCAGCGGCGGACAATTGTCACAATTTATGG ACCAAACGAACCCGTTGTCGGAAGTTACCCATAAACGACGTCTGTCGGCACTCGGGGAAGGCGGTCTTGTTAAAGAGCGT GCCGGATTTGAAGTGCGTGACGTTCACCCGACTCACTACGGACGTATCTGTCCGATTGAGACTCCTGAGGGACAAAACAT TGGTTTGATCAATACGTTGGCGACCTATTCAAAAGTTAACGAACACGGATTTATCGAAGCTCCGTATAACGTTGTTAAAG ATGGTGTTGTTACGGATGAAGTTGTTTATTTGACGGCTACTCAAGAAGAGGGAAAAGTTATCGCTGCGGCATCAAGCCGT ATCGATGACAAAGGTAATTTCCTTGATGACTTGGTTGAAACACGTCAAGACGGTGAATATCCGCTTGTTTCACCAAAAGA TTGTGAGCTTCGTGATTTGACTCCGCATATGGTTGTCGGTGTTGCGGCAAGCTTGATTCCGTTCTTGGAACACGATGACG CGAACCGTGCATTGATGGGATCGAACATGCAACGTCAAGCGGTACCGTTATTGCGTCCTGAAGCGCCTATGGTCGGAACA GGGGTTGAAAAACTCGTAGCCCGTGACTCATGGGAATGTGTTAAAGCTGAACGAAGCGGTATAGTCGAAAAAGTCGACTC CAAGCATATTTATATCATGGGCGAAGACGAAGACGGAACGTTTATCGATTATTATCCGTTGCAAAAAAATCTTCGTACCA ACCAAAATACGACGTTCTTGCAAAAACCGATTGTCAAACAAGGGCAAATGGTAACCAAAGGGCAAATCATCGCGGATGGT CCGAACATGGATAAAGGTGAATTGGCACTTGGTATCAATGCACTCGTCGCGTTCATGCCGTGGAACGGATACAACTTCGA AGATGCGATCGTTATGTCTGAACGCATGATCCGCGAAGATGCATTTACATCCGTTCATATTTATGAGAAAGAGGCGGAAG CGCGCGAGCTTAAGCACGGTGTTGAAGAGATTACCCGTGATATTCCGAACGTTCGTGACGATGAACTTGCTCACCTCGAT GACAGCGGTATCGTAAAAATCGGTACCTATGTTAAAGGCGGAATGATCCTTGTCGGTAAAGTTTCTCCGAAGGGTGAAGT AAAACCGACTCCGGAAGAGCGCTTGCTGCGCGCTATCTTCGGTGAAAAAGCGGGTCACGTTGTGAACAAATCGCTTTACT GTACACCGAGTATGGAAGGGGTTGTTGTTGACGTTAAAGTCTTCACCAAAAAAGGGTATGACAAAGATCCTCGTACGTTA GAGCTTGAAAAACAAGAGCGTGACGAACTCGAGCGCGAGCATTACGACCGTCTTTTGATGATTGACAAAGAGGAGATGCT CCGAATCATTTCATTGCTTACAAAACATCCGTTGCTCAGCGATGTCAGCATCAACGGCAACGAATATAAAGCGGGTGAAA ACGTGAAAGGTGACGATCTTAAAGAGGTCAACCGTTTTGCGATGAATAACGTCGTTAAAGCGTTCAGCGACGATATTCAA GAGAAATATAACCAAACGAAAAACCATTTCCAAAAAGAGAAGAAAAAATTCCGTGACGAACACGAAGAAAAACTCTCTAT CTTGGAAAAAGACGACATCCTTCCAAACGGTGTCGTTAAATTTGTAAAAGTTTATATCGCAACGAAACGTAAACTCAAAG TCGGGGATAAAATGGCGGGACGTCACGGGAACAAGGGTATCGTTTCTACGATCGTTCCTCAAGTTGACATGCCGTACATG GCAAACGGGCGTTCTGTCGACGTTTGTTTGAATCCGCTCGGGGTTCCGTCTCGTATGAATATCGGGCAAATCCTTGAGAT GCACCTTGGTATGGTCGGTAAAGAACTCGGGTTCCAAATCCAAGACATTTTCGAAGCGAAACAAAAAGAGTTCATCTCTG AATTGCGTGAAAAAATGATCACTTTTGCTGATGTAGCTGGATTGATGAACGCCGCTAAATTGCTGGGTGAAATGGATGAT CAAACGCTTCTTGGCTATGCTCAAGACTGGTCAAAAGGGGTTAAATTCGCGACACCTATTTTCGAAGGGGTTACCGAAGC TGAGTTTGCAAAACTTTTCGAATTGGCCAAATTGGACACAGATGGAAAAATGGAGCTTTACGACGGTAAAACCGGCGATA AAATGAAAGAGCGCGTTAACGTCGGTTATATGTACATGCTTAAACTCCATCACTTGGTTGATGAGAAAGTGCATGCCCGT TCAACCGGACCATACTCACTTGTTACCCAACAACCGGTCGGTGGTAAAGCGCTGTTCGGTGGACAACGTTTCGGGGAAAT GGAAGTATGGGCTCTTGAAGCCTATGGTGCTTCTGCCGTCCTTAAAGAGATGTTGACGATCAAATCGGATGATGTCGACG GACGTGTTCGTGCATACAAAGCGATTACTAAAGGGGAGAGTGTACCAGCATCAGGTATCCCTGAAACACTCTTCGTATTA ACCAAAGAGCTCCAATCATTGGCGCTTGATATTGAGATTTTTGACGAGGTGGATGACAATGAGTAA Protein sequence : MLNTLHSGNRLRVDFAKTPQQIEVPNLLQLQQSSYESFLMLDQKDRTKSGIERVFQSVFPIHDSQNRLSLEYLGSEVGRP KYTVRECMERGLTYSVSLRMKTRLMIWDRDENTKEKTGVKDIKEQTIFIRDIPLMTDRTSFVINGVERVVVNQLHRSPGV IFKEEESTTAGSKMIFTGQIIPDRGSWLYFEYDPKDILYMRINKRRKVPVTIMFRALGYSKQDILKMFYPLQKIRVEENK YLMDFDPEQFAGRLGYDLIDSEGKLLVAAGKRLSTKKAEKLISEGVKAIQYPIETLIERHLAEPIIDAETGEVMFDTMTQ LDETKLKKMVEAGVKEFVIANDLAEGYDSAIINAFIADADSLKLLRQTEIIEDENDLAAIRIYKVMRPGEPVTKEAAKVF VNQLFFDPERYDLTRVGRMKMNHKLGLNIPEYVTVLTNEDIINTVKYVVKVKNGQGHIDDRDHLGNRRIRSIGELLGNEL HNGLVKMQKAIKDKLSTMSGPTTELMPHDLINSKMITSTIMEFFSGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKER AGFEVRDVHPTHYGRICPIETPEGQNIGLINTLATYSKVNEHGFIEAPYNVVKDGVVTDEVVYLTATQEEGKVIAAASSR IDDKGNFLDDLVETRQDGEYPLVSPKDCELRDLTPHMVVGVAASLIPFLEHDDANRALMGSNMQRQAVPLLRPEAPMVGT GVEKLVARDSWECVKAERSGIVEKVDSKHIYIMGEDEDGTFIDYYPLQKNLRTNQNTTFLQKPIVKQGQMVTKGQIIADG PNMDKGELALGINALVAFMPWNGYNFEDAIVMSERMIREDAFTSVHIYEKEAEARELKHGVEEITRDIPNVRDDELAHLD DSGIVKIGTYVKGGMILVGKVSPKGEVKPTPEERLLRAIFGEKAGHVVNKSLYCTPSMEGVVVDVKVFTKKGYDKDPRTL ELEKQERDELEREHYDRLLMIDKEEMLRIISLLTKHPLLSDVSINGNEYKAGENVKGDDLKEVNRFAMNNVVKAFSDDIQ EKYNQTKNHFQKEKKKFRDEHEEKLSILEKDDILPNGVVKFVKVYIATKRKLKVGDKMAGRHGNKGIVSTIVPQVDMPYM ANGRSVDVCLNPLGVPSRMNIGQILEMHLGMVGKELGFQIQDIFEAKQKEFISELREKMITFADVAGLMNAAKLLGEMDD QTLLGYAQDWSKGVKFATPIFEGVTEAEFAKLFELAKLDTDGKMELYDGKTGDKMKERVNVGYMYMLKLHHLVDEKVHAR STGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGASAVLKEMLTIKSDDVDGRVRAYKAITKGESVPASGIPETLFVL TKELQSLALDIEIFDEVDDNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 49 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 49 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 49 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 49 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 49 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 49 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 49 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 49 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 48 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 48 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 48 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 48 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 48 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 48 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 48 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 48 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 47 |
| Sulku_2270 | YP_004061130.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 47 |
