Gene Information

Name : CKC_05160 (CKC_05160)
Accession : YP_004063266.1
Strain : Candidatus Liberibacter solanacearum CLso-ZC1
Genome accession: NC_014774
Putative virulence/resistance : Unknown
Product : queuine tRNA-ribosyltransferase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0343
EC number : -
Position : 1101515 - 1102648 bp
Length : 1134 bp
Strand : -
Note : COG0343 Queuine/archaeosine tRNA-ribosyltransferase

DNA sequence :
ATGGATAAAAATTTTTGCTTCAATATTAAAGCTAAAAGTGGCAATGCTCGTTTAGGTGAGATTATCACCCCTAGGGGGAT
TATTAAAACGCCAGCATTTATGCCTGTCGGCACTTCTGGAGCTGTTAAAGCTATGTACTTTGATCAGGTACGTGATTTGG
GTGCAGATGTTATTTTAGGAAATGCATATCATTTAATGTTACAACCCGGGGCTGATCGTATTGCCCGCCTAGGTGGATTA
CATCAATTTATTCGTTGGTTCAAGCCAATACTAACGGATTCAGGTGGTTTTCAAGTGATGTCTCTTTCAAAATTATGTTC
TATCGATGAACAAGGTGTTAGTTTTAGGAGTCATATAGATGGTAGTTTACATCGAGTTTCGCCAGAAGATTCTATTGAAA
TTCAAAATCTTCTTGGATCTGATATACAAATGCAACTTGATGAATGTTTGGCGTTACCAGCTGATGAGAAAGAACTAAAA
CGCGCGATGGAATTATCGTTGAGATGGGCTGAAAGATCTCTTGTGGCATTTGGTAATCAACCAGGTAAAGCCTTGTTTGG
TATTGTGCAGGGTGGTGATAATATTAGTTTGCGATCTTTTTCTGCTGCACGGCTAAAAGAGTTAGATCTGAAGGGTTATG
CTATTGGTGGCTTAGCGGTTGGTGAACCACAAGAAGTTATGTTGCATATTTTATCGAATATTTTACCTATATTACCTGTT
GAAAAACCGCATTATTTAATGGGAGTTGGTACGCCAGATGATATTTTAAAGTCAGTAAGTTGTGGTGTAGATATGTTTGA
TTGTGTCATGCCTACTCGTGCAGGGCGACATGGTTTATCTTTTACTCGTTTTGGTAAAATAAATTTGCGTAATGCAAGAC
ATACCGATGATATGCGTCCTTTGGATGCAGAATCTAATTGTCCAGCATTGCGTGATTATTCTCGTGCTTATTTACATCAT
CTTTTACATGTCAATGAATCGTTAGCAGGTATGATTCTTTCTTGGGCAAATCTTTTCTATTATCAAGATTTAATGAGAGA
AATAAGAAATGCTATTGCTCAAGATTGTTTTGCTGATTTTATGATGCAAACACAAGAAAATTGGAGGAAAGGCGATATTC
CTCCTCTTGTTTAA

Protein sequence :
MDKNFCFNIKAKSGNARLGEIITPRGIIKTPAFMPVGTSGAVKAMYFDQVRDLGADVILGNAYHLMLQPGADRIARLGGL
HQFIRWFKPILTDSGGFQVMSLSKLCSIDEQGVSFRSHIDGSLHRVSPEDSIEIQNLLGSDIQMQLDECLALPADEKELK
RAMELSLRWAERSLVAFGNQPGKALFGIVQGGDNISLRSFSAARLKELDLKGYAIGGLAVGEPQEVMLHILSNILPILPV
EKPHYLMGVGTPDDILKSVSCGVDMFDCVMPTRAGRHGLSFTRFGKINLRNARHTDDMRPLDAESNCPALRDYSRAYLHH
LLHVNESLAGMILSWANLFYYQDLMREIRNAIAQDCFADFMMQTQENWRKGDIPPLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tgt AAT96069.1 Tgt Not tested T-PAI Protein 7e-75 50
tgt AAT96181.1 Tgt Not tested T-PAI Protein 7e-75 50
tgt AAT96041.1 Tgt Not tested T-PAI Protein 5e-75 50
tgt AAT96105.1 Tgt Not tested T-PAI Protein 5e-75 50
tgt AAT96121.1 Tgt Not tested T-PAI Protein 5e-75 50