Gene Information

Name : CKC_r06093 (CKC_r06093)
Accession : -
Strain : Candidatus Liberibacter solanacearum CLso-ZC1
Genome accession: NC_014774
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 305984 - 307492 bp
Length : 1509 bp
Strand : +
Note : -

DNA sequence : 
ATGAGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATGCAAGTCGAGCGCTTATTTTTAATAGGA
GCGGCAGACGGGTGAGTAACGCGTGGGAATCTACCTTTTTCTACGGGATAACGCACGGAAACGTGTGCTAATACCGTATA
CGCCCTGAGAAGGGGAAAGATTTATTGGAGAGAGATGAGCCCGCGTTAGATTAGCTAGTTGGTGGGGTAAATGCCTACCA
AGGCTACGACCTATAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCA
GCAGTGGGGAATATTGGACAATGGGGGGCAACCCTGATCCAGCCATGCCGCGTGAGTGAAGAAAGGCCTTAGGGTTGTAA
AGCTCTTTCGCCGGAGAAGATAATGACGGTATCCGGAGAAGAAGTCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATAC
GAAGGGGGCGAGCGTTGTTCGGAATAACTGGGCGTAAAGGGCGCGTAGGCGGGTAATTAAGTTAGGGGTGAAATCCCAAG
GCTCAACCTTGGAACTGCCTTTAATACTGGTTATCTAGAGTTTAGGAGAGGTGAGTGGAATTCCGAGTGTAGAGGTGAAA
TTCGCAGATATTCGGAGGAACACCAGTGGCGAAGGCGGCTCACTGGCCTGATACTGACGCTGAGGCGCGAAAGCGTGGGG
AGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGAGTGCTAGCTGTTGGGTGGTTTACCATTCAGTGGC
GCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACA
AGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGCAGAACCTTACCAGCCCTTGACATATAGAGGACGATATCAGAGA
TGGTATTTTCTTTTCGGAGACCTTTATACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTC
CCGCAACGAGCGCAACCCCTACCTCTAGTTGCCATCAAGTTTAGATTTTATCTAGATGTTGGGTACTTTATAGGGACTGC
CGGTGATAATCCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATG
GTGGTTACAATGGGTTGCGAAGTCGCGAGGCGGAGCTAATCCCAAAAGGCCATCTCAGTTCGGATTGCACTCTGCAACTC
GAGTGCATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTCTCGGGCCTTGTACACACCGC
CCGTCACACCATGGGAGTTGGTTTTGCTTGAAGACGGTGCGCTAACCGTAAGGAGGCAGCCGGCCACGGTAGGGTCAGCG
ACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGTGGCTGGATCACCTCCTTTCTAAGGAAG

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-127 89.9
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-127 89.9
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-127 89.8
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-127 89.8
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-127 89.8
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-127 89.8