Gene Information

Name : CKC_r06097 (CKC_r06097)
Accession : -
Strain : Candidatus Liberibacter solanacearum CLso-ZC1
Genome accession: NC_014774
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1004828 - 1006334 bp
Length : 1507 bp
Strand : -
Note : -

DNA sequence : 
ATGAGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCAGGCTTAACACATGCAAGTCGAGCGCTTATTTTTAGTAGGA
GCGGCAGACGGGTGAGTAACGCGTGGGAATCTACCTTTTTCTACGGGATAACGCACGGAAACGTGTGCTAATACCGTATA
CGCCCTGAGAAGGGGAAAGATTTATTGGAGAGAGATGAGCCCGCGTTAGATTAGCTAGTTGGTGGGGTAAATGCCTACCA
AGGCTACGATCTATAGCTGGTCTGAGAGGACGATCAGCCACACTGAGACTGAGACACGGCCCAGACTCCTACGGGAGGCA
GCAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCCATGCCGCGTGAGTGAAGAAGGCCTTAGGGTTGTAAAG
CTCTTTCGCCGGAGAAGATAATGACGGTATCCGGAGAAGAAGTCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGA
AGGGGGCGAGCGTTGTTCGGAATAACTGGGCGTAAAGGGCGCGTAGGCGGGTAATTAAGTTAGGGGTGAAATCCCAAGGC
TCAACCTTGGAACTGCCTTTAATACTGGTTATCTAGAGTTTAGGAGAGGTGAGTGGAATTCCGAGTGTAGAGGTGAAATT
CGCAGATATTCGGAGGAACACCAGTGGCGAAGGCGGCTCACTGGCCTGATACTGACGCTGAGGCGCGAAAGCGTGGGGAG
CAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGAGTGCTAGCTGTTGGGTGGTTTACCATTCAGTGGCGC
AGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAG
CGGTGGAGCATGTGGTTTAATTCGATGCAACGCGCAGAACCTTACCAGCCCTTGACATATAGAGGACGATATCAGAGATG
GTATTTTCTTTTCGGAGACCTTTATACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCC
GCAACGAGCGCAACCCCTACCTCTAGTTGCCATCAAGTTTAGATTTTATCTAGATGTTGGGTACTTTATAGGGACTGCCG
GTGATAATCCGGAGGGAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGT
GGTTACAATGGGTTGCGAAGTCGCGAGGCGGAGCTAATCCCAAAAGGCCATCTCAGTTCGGATTGCACTCTGCAACTCGA
GTGCATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTCTCGGGCCTTGTACACACCGCCC
GTCACACCATGGGAGTTGGTTTTGCTTGAAGACGGTGCGCTAACCGTAAGGAGGCAGCCGGCCACGGTAGGGTCAGCGAC
TGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGTGGCTGGATCACCTCCTTTCTAAGGAAG

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-127 89.8
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-127 89.8
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-127 89.7
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-127 89.7
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-127 89.7
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-127 89.7