Gene Information

Name : PSM_B0219 (PSM_B0219)
Accession : YP_004065168.1
Strain :
Genome accession: NC_014800
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 245509 - 248127 bp
Length : 2619 bp
Strand : +
Note : -

DNA sequence :
ATGTCAACGATGACATTAAATAAATTAGTTGAAAAACTAAGTCCAGATTGTAGAAAAAGCTTAGAGGCAGCTGTTGCAAT
ATGTAATAGCCGCAGCCATTTTACGGTTGAATTAGAGCATTGGTTGTTAGCCATGATTGAGCAGCAACTAGACGATGTTA
GACTCATATTCGGTTCTTTCGATATTGATATTGATCAGGTGAAGCAAGATTTAAACCAATCACTAGAGTCATTTAAAACG
GGCAGTGATTCATCGCCTAGCCTATCAGTGCATGTGACTACATTATTAAGGCAGTCATGGTTAAGTACCAGTATAGAATT
CACCGATGAGCAAATTCGCAGTGCTTATGTTATTTATACGCTAACAAAAGACGATACGCTTTCAAGTTTAGTAACGCGCT
GTAGCAAATTGTTTAATAACATAGAGCCAGGCCAACTGTTACATGCATGGCCTGAAATTGTTGCACAATCGCAAGAGCGA
AATACCGCCAATGTAACTGCTGCAACACCTGCAAATGGTTCATCTAAAACACCGAGTTTAGATCAATTTACAGTTGATTT
AACCGCTCAAGCAAAAGCGGGGAAAATAGACCCTATTCTAGGTCGTGATTTTGAAATACGTCAAATGGTTGATATTTTAA
CTAGACGTCGTCAAAACAACCCAATCTTGACGGGTGAAGCGGGTGTAGGTAAAACCGCTGTGGTTGAAGGACTTGCCCTA
AGAATTGCCCAAAAAGACGTACCTGCAGTATTACAAAACGTTAAGTTGCACAGCCTAGATTTGGCTTTGCTTCAAGCAGG
TGCGGGCATGAAAGGTGAGTTTGAAAATCGCTTAAAGTCGTTAATTAACGAAGTTAAAAACGCTGTTGACCCTGTGATTC
TTTTTATAGATGAAGCTCACACTATGATTGGTAGTGGCGGACAAGCGGGTCAAAACGATGCGGCTAACTTACTAAAACCT
GCTTTAGCAAGAGGGGAATTACGTACTATTGCAGCAACAACGTGGGCTGAATATAAAAAGTTTTTTGAAAAGGATGCTGC
ACTAACACGTCGTTTCCAAGTGGTAAAGGTTGAAGAGCCAACGCCAGAAAAAGCGGTTGCTATGCTACGTGGTTTAGTTC
CTGTTATGGAAAAGCATCATAAAGTTTTTATTTCAGAGCAAGCACTTGAAAGTGCGGTGCATCTATCGCACAGATACATT
ACTGCCAGGCAACTTCCCGATAAAGCAGTTGCATTGTTAGATACGGCCTGTGCTCGTGTTGCTATGAGCCAAGCATCGAC
ACCTAATGCGATTGAGCAGTTAATGAATAGACTTAGTGAAATTGAAGCGCAAGTTTTAATGTTAAATCGTGAGCAAAAAA
CCGGTTTAGATCATAGCGAACAATTATCAGCACTTAAATCTGAACTAGTTGAGATTGAACAGCAACTTGAACCATTAAAT
GAGCAGTTCAACGTTGAAAAAGGCATCGTTGCAGAATTAAACCAAGCGCTTGAATCGATTAACACCAACGATGCAGACTC
TTCTGCTGAAGTACTTGAGCAGTTAAAAGAAAGTAAGCTTAAGCTAGCCTCGTACGAACATAACATGGTGCATTGGCAAG
TTGATGAAGAGCTGATTGCACAGGTTATTTCTGATTGGACTGGTATTCCTGTTGGTAAAATGCATGAAGATGAAATTCAT
GGCATTTTAAATTTAGCTGCGCAAATGAAACAACGCGTAGTTGGCCAAGATCATGCGCTTGAACTCATGGCTAAAGTAGT
ACAAACCTCTCGTGCTCAGCTTGCAGATGAAAGTCGCCCTAATGGTATATTTATGCTGGCAGGCCCAAGCGGAGTGGGTA
AAACAGAGACCGCGCTTTCACTAGCACAAGAAGTATATGGCAGTGAAGATAACGTAACAGTTATTAATATGTCTGAGTTT
AAAGAAGAGCATAAAGTGTCATTACTACTTGGCTCACCTCCAGGTTATGTTGGTTATGGCGAAGGCGGTATTTTAACCGA
AGCAGTAAGAAGAAAACCATATAGTGTGGTGCTGCTAGATGAAATGGAAAAAGCCCATCCAGGCGTGCAAGATATTTTCT
ATCAAGTATTCGATAAAGGCACCATAAAAGACGGTGAAGGCCGAGATATCGACTTTAAAAATACCATCATTATTATGACC
TCAAATGTGGGTACTGATACCACAATGAGCTTATTTGAAGATGAAGAAAGTAAGCCAAGTATTAAAGGCTTATTAAAAGC
ATTACAAGATGATTTATTAGGGGCATTTAAGCCTGCATTTTTAGGACGAATTAACGTTATTCCATATATTCCGTTAAGTG
ATGAAATTCTTACCCAGATTGCTGCGTTGCAAATTAGTAAAATAATTAAGCGTGTTAAAAAGCACTATGATGCGCAATTA
ACGTATAACGATGATGTGATTGAGCACATTATTGCAAATTGTCAAAATGCCGGATCGGGTGCACGAAATATTCACACCAT
ATTACAGAATAAAGTACTACCTCTATTGTCTGAGATCTTGCTTTCAAGCATGGTTGAAGGTGAAAAAGTAACATCTATCT
CATTGTTAATTAAAGATAATGAGTTCGATGTTGAATTAACTAAAGTTAATTCAAAATAA

Protein sequence :
MSTMTLNKLVEKLSPDCRKSLEAAVAICNSRSHFTVELEHWLLAMIEQQLDDVRLIFGSFDIDIDQVKQDLNQSLESFKT
GSDSSPSLSVHVTTLLRQSWLSTSIEFTDEQIRSAYVIYTLTKDDTLSSLVTRCSKLFNNIEPGQLLHAWPEIVAQSQER
NTANVTAATPANGSSKTPSLDQFTVDLTAQAKAGKIDPILGRDFEIRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLAL
RIAQKDVPAVLQNVKLHSLDLALLQAGAGMKGEFENRLKSLINEVKNAVDPVILFIDEAHTMIGSGGQAGQNDAANLLKP
ALARGELRTIAATTWAEYKKFFEKDAALTRRFQVVKVEEPTPEKAVAMLRGLVPVMEKHHKVFISEQALESAVHLSHRYI
TARQLPDKAVALLDTACARVAMSQASTPNAIEQLMNRLSEIEAQVLMLNREQKTGLDHSEQLSALKSELVEIEQQLEPLN
EQFNVEKGIVAELNQALESINTNDADSSAEVLEQLKESKLKLASYEHNMVHWQVDEELIAQVISDWTGIPVGKMHEDEIH
GILNLAAQMKQRVVGQDHALELMAKVVQTSRAQLADESRPNGIFMLAGPSGVGKTETALSLAQEVYGSEDNVTVINMSEF
KEEHKVSLLLGSPPGYVGYGEGGILTEAVRRKPYSVVLLDEMEKAHPGVQDIFYQVFDKGTIKDGEGRDIDFKNTIIIMT
SNVGTDTTMSLFEDEESKPSIKGLLKALQDDLLGAFKPAFLGRINVIPYIPLSDEILTQIAALQISKIIKRVKKHYDAQL
TYNDDVIEHIIANCQNAGSGARNIHTILQNKVLPLLSEILLSSMVEGEKVTSISLLIKDNEFDVELTKVNSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-170 44
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-144 41
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-144 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSM_B0219 YP_004065168.1 ATPase VFG2076 Protein 0.0 47
PSM_B0219 YP_004065168.1 ATPase VFG2084 Protein 8e-168 44