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Name : clpB (PSM_A1008) Accession : YP_004068104.1 Strain : Genome accession: NC_014803 Putative virulence/resistance : Virulence Product : ATP-dependent protease, Hsp 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1067118 - 1069694 bp Length : 2577 bp Strand : + Note : - DNA sequence : ATGCGTTTAGATAGATTTACAAGTAAATTTCAGTCTGCGCTTTCAGATGCGCAATCATTAGCGCTAGGTCGCGATCATCA ATTTATTGAACCTGTGCATCTAATGTACGCTTTGTTAAAACAAAGCGGCTCAAGTGTACGTGCACTATTTGCACAAATGA GCATCAGCGTTGATGAACTCAACACTAAATTATCACAAGAGATAGAAAAGTTATTTAAAGTGGAAGGTGTTGGTGGCGAT GTACAGTTGTCAAATAACATGGTGTCACTGATAAACCTATGTGATAAATACGCCCAAAAGCGTAAAGATAAATACATTTC AAGTGAGTTGTTTGTATTAGTTGCGTGTGAAGATAAAGGTCCGCTTGGCAGTGTTTTTAAAGCACTTAACATTACTGCGA GTAAGGTTGAAACGGCAATTGAGGCGATTCGTGGTGGCCAAAAAGTTGACGATCCTAATGCGGAAGAAACACGCCAAGCA CTTGAAAAGTACACCATCGATTTAACTGAGCGTGCAGAGCAAGGTAAGCTTGACCCTGTAATCGGTCGTGATGATGAAAT TCGCCGCACTATTCAAGTATTACAACGCCGTACCAAAAATAACCCTGTGTTAATTGGTGAGCCAGGGGTGGGTAAAACAG CCATAGCTGAAGGGCTTGCACAGCGTATTATTAATGGTGAAGTGCCTGAGGGCTTAAAAAACAAGCGCGTATTATCACTT GATTTAGGCGCATTAGTTGCTGGTGCAAAATACCGAGGTGAATTTGAAGAGCGTTTAAAATCAGTACTTAATGAGTTGGC TAAAGAAGAAGGACAAGTTATTTTATTTATTGATGAAATTCATACCATTGTTGGTGCTGGTAAAAGTGATGGCGCTATGG ATGCGGGTAACATGTTAAAACCTGCCTTAGCACGCGGTGAACTCCATTGCGTAGGCGCAACCACTTTAGATGAATACCGT AAATACATTGAAAAAGATGCTGCGCTTGAGCGCCGTTTCCAAAAGGTATTAATAGAAGAGCCTTCAGTAGAAGACACCAT TGCTATTCTGCGTGGCTTGAAAGAGCGTTACGAATTACACCATTCAGTGGAGATCACCGACCCTGCAATCGTTGCCGCAG CGCAGTTATCGCATCGTTATATTAGTGATCGCCAATTACCCGATAAAGCAATCGATTTAATTGACGAAGCGGGCTCTTCT ATTCGCTTGCAAATTGATTCAAAGCCAGAAGCTTTAGATAAATTAGAGCGTCGCATTATCCAATTAAAAATTGAAGATAA CGCATTGGCCAAAGAGAAAGATGAAGCAAGTCAAAAGCGCCGTACAGAAATGGTCGAGCTGATCACTGAGCTTGAAGGGC AATACCGTGAACTAGATGAAGTATGGAATGCAGAAAAAGCGTCTTTACAAGGCACGCAGGTTATTAAAGCTGAGCTAGAG CAGGCACGACTTGATTTAGAAGTGGCTCGCAGAGCAAGTGACTTGCAGCGTATGTCTGAACTGCAATATGGACGTATACC TGAGCTTGAGCGCAAACTCGATTTAGCATCACAAGCAGAAATGCAAGAAATGAGCTTGCTTAAAAATCAGGTGGGCGAAG ATGAAATTGCAGAAATTTTATCACGTTGGACCGGGATCCCAGTGGCGCGTATGCTCCAAGGTGAACGTGAAAAACTATTA CAAATGGAAGAGCAGTTACATAACAAAGTCATTGGTCAAGATGAGGCCGTCGTTGCGGTGGCTAATGCCATTCGTCGTTC GCGTGCAGGGCTTGCTGATCCCAATCGTCCAATTGGCTCGTTCTTATTTTTAGGGCCTACAGGGGTTGGTAAAACAGAAC TTACCAAGGCACTAGCAGGCTATATGTTTGATACCGAAAGTGCCATGGTGCGTATAGATATGTCTGAGTTTATGGAAAAA CACTCAGTCGCACGTCTAGTCGGTGCGCCTCCAGGGTACGTAGGTTACGAAGAAGGTGGTTATTTAACCGAAGCTGTTCG TCGTAAACCCTATTCGGTTATTTTGCTTGATGAAATAGAAAAAGCGCATCCAGATGTGTTTAATATTTTATTACAAGTCC TTGATGACGGGCGTTTAACGGATGGCCAAGGGCGTACGGTTGATTTTAAAAATACGGTTATCATTATGACCTCCAACTTG GGCTCAGATATCATTCAAGAGCAAGCGGGAAGTAATGACTATGACGAGCTTAAAGCAAAAGTCATGGGTGTTTTACATAA TGAATTTAGACCCGAGTTCATTAACCGTATTGATGAAACTGTGGTATTTCACTCACTTTCACATAGTCATATTAAAGAAA TTGCAGATATTCAGTTAAGCAAATTACGTCAACGATTGACAGAGATGGGGTATTTACTTGAGTTGACAGATGCTGCTCTT GAGCGAATTGCTGCCAGTGGCTTTGATCCTGTCTATGGCGCTCGTCCACTTAAACGGGCAATACAGCAAACCATTGAAAA TCCATTAGCACAAAAACTGCTTAATAATGAATTTCAACCAGGTTGTATCATTGTCATTGATGCTAACGAAGACGGCTTAG TGTTTACGAGTCGATAA Protein sequence : MRLDRFTSKFQSALSDAQSLALGRDHQFIEPVHLMYALLKQSGSSVRALFAQMSISVDELNTKLSQEIEKLFKVEGVGGD VQLSNNMVSLINLCDKYAQKRKDKYISSELFVLVACEDKGPLGSVFKALNITASKVETAIEAIRGGQKVDDPNAEETRQA LEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSL DLGALVAGAKYRGEFEERLKSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYR KYIEKDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLIDEAGSS IRLQIDSKPEALDKLERRIIQLKIEDNALAKEKDEASQKRRTEMVELITELEGQYRELDEVWNAEKASLQGTQVIKAELE QARLDLEVARRASDLQRMSELQYGRIPELERKLDLASQAEMQEMSLLKNQVGEDEIAEILSRWTGIPVARMLQGEREKLL QMEEQLHNKVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGYMFDTESAMVRIDMSEFMEK HSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNL GSDIIQEQAGSNDYDELKAKVMGVLHNEFRPEFINRIDETVVFHSLSHSHIKEIADIQLSKLRQRLTEMGYLLELTDAAL ERIAASGFDPVYGARPLKRAIQQTIENPLAQKLLNNEFQPGCIIVIDANEDGLVFTSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-156 | 43 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-106 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_004068104.1 | ATP-dependent protease, Hsp 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE | VFG2076 | Protein | 2e-111 | 43 |
