Gene Information

Name : Mspyr1_26980 (Mspyr1_26980)
Accession : YP_004077164.1
Strain : Mycobacterium gilvum Spyr1
Genome accession: NC_014814
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : -
Position : 2766460 - 2768676 bp
Length : 2217 bp
Strand : +
Note : PFAM: malate synthase; TIGRFAM: malate synthase G

DNA sequence :
ATGACGGATCGCGTGACGGTGGGCAACCTGCGCGTCTCTCCCGTGTTGTACGACTTCATCAACAACGAGGCGTTGCCGGG
TACCGACATCGACCCCGACACGTTCTGGTCCGGGGTCGACAAGATCGTCGCCGACCTGACGCCCAAGAACCAGGACCTGC
TCGCCCGGCGCGACCATCTGCAGGCCCAGATCGACAAGTGGCACCGCGCGCGGGTGATCGGCGGATTCGAGGCCGAGGAC
TACAAGCAGTTCCTCACCGAGATCGGCTACCTGGAACCCGAGCCCGCCGACTTCTCCGTCACCACCTCCGGCGTCGACGA
CGAGATCACCACCACCGCGGGCCCGCAGCTCGTCGTGCCGATCCTCAACGCCCGCTTCGCACTCAACGCCGCCAACGCCC
GTTGGGGTTCGCTCTATGACGCCCTCTACGGCACCGACGTCATCTCCGACGAGGACGGCGCCGAGGCGGGCAGCTCGTAC
AACAAGCGGCGCGGCGACAAGGTCATCGCCTACGCGCGCAGGTTCCTCGACGGCGCGGCCCCACTGGCGTCCGGATCGTG
GACGGACATCACCGGCCTTCGCATCGACGACGGGGCGGTGAGCGCGACGCTCGACGACGGCGGCTCGGTCGCGCTGGCCG
ACCCGCAGCAGTTCGTCGGCTACCACGGCGAACCCGACGCGCCGACCGCGGTGCTGCTGGCCAACAACGGCCTGCACATC
GAGATCCTGATCGATGCCGACTCCCCCATCGGCTCCACCGACAAGGCCGGCATCAAGGACGTCGTGCTGGAGTCCGCCAT
CACCACGATCATGGACTTCGAGGACTCCGTGGCGGCCGTCGACGCCGACGACAAGGTGCTGGGCTACCGGAACTGGTTGG
GGCTCAACCGCGGTGACCTCGCCGAAGAGGTCAGCAAGGGCGGCAAGACGTTCACCCGGGTGCTCAACTCCGACCGCACC
TACCGTGCTCCCGACGGCGAGACCGAGCTCACTCTGCCCGGCCGGAGCCTGCTGTTCGTGCGCAACGTGGGTCACCTGAT
GACCAACGACGCGATCGTGGTCGACGACAACGGTGCCGACGGCGCCGAGGTCCCCGAGGGCATCCAGGACGCGCTGTTCA
CCAGCCTCATCGGCATCCACGGTCTGCGGTCCGCCGGCGACGACGACACCAAGAACGGCCCGTTGCTCAACAGCCGAACC
GGGTCGATCTACATCGTGAAGCCCAAGATGCACGGACCCGACGAGGTCGCGTTCACCTGTGAGCTGTTCAGCCGCGTCGA
GGACGTCCTCGGTCTGCCGCAGAACACCATCAAGGTCGGCATCATGGACGAAGAGCGCCGCACGACGCTGAACCTGAAGG
CGTGCATCAAGGCCGCCGCCGACCGCGTCGTGTTCATCAACACCGGATTCCTCGACCGCACGGGCGATGAGATCCACACG
TCGATGGAAGCGGGCCCGATGATCCGCAAGGGCGCGATGAAGTCGACCGACTGGATCGCCGCCTACGAGAATCAGAACGT
CGACATCGGCCTGGAGACCGGGCTGTCCGGTAAGGCCCAGATCGGCAAGGGCATGTGGGCCATGACCGACCTGATGGCCG
ACATGGTCGAGCAGAAGATCGGCCAGCCCAAGGCCGGCGCCACCACCGCGTGGGTGCCCTCGCCGACCGCGGCCACCCTG
CACGCGATGCACTACCACCAGGTCGATGTGTTCGCGGTGCAGTCGGAACTCGCCGGCAAGCGCCGCTCGACCCTCGACGA
ACTCCTGACCATCCCGCTGGCCACGGAACTGGCCTGGGCGCCGGAGGAGATCCGCGAGGAGGTCGACAACAACTGCCAGT
CGATCCTCGGCTACGTCGTGCGCTGGATCGACGCGGGTGTCGGCTGCTCGAAGGTGCCCGACATCCACGACGTCGCGTTG
ATGGAAGACCGTGCGACACTGCGTATCTCGAGTCAGCTGCTGGCCAACTGGCTGCGCCACGGCGTGATCACCGAAGAGGA
CGTCAAGACCAGCCTGCGGCGCATGGCGGCCGTGGTCGACGAGCAGAACGCCGCGGACCCCGACTTCCGGCCGATGGCAT
CCGATCCCGACAACAGCATCGCGTTCCAGGCGGCCCAGGAACTGATCCTCGACGGCGCGGCGCAGCCCAGCGGCTACACC
GAGCCGATCCTGCACCGCAGGCGCCGGGAGTACAAGGCAGCTAGTAACGTTGGCTGA

Protein sequence :
MTDRVTVGNLRVSPVLYDFINNEALPGTDIDPDTFWSGVDKIVADLTPKNQDLLARRDHLQAQIDKWHRARVIGGFEAED
YKQFLTEIGYLEPEPADFSVTTSGVDDEITTTAGPQLVVPILNARFALNAANARWGSLYDALYGTDVISDEDGAEAGSSY
NKRRGDKVIAYARRFLDGAAPLASGSWTDITGLRIDDGAVSATLDDGGSVALADPQQFVGYHGEPDAPTAVLLANNGLHI
EILIDADSPIGSTDKAGIKDVVLESAITTIMDFEDSVAAVDADDKVLGYRNWLGLNRGDLAEEVSKGGKTFTRVLNSDRT
YRAPDGETELTLPGRSLLFVRNVGHLMTNDAIVVDDNGADGAEVPEGIQDALFTSLIGIHGLRSAGDDDTKNGPLLNSRT
GSIYIVKPKMHGPDEVAFTCELFSRVEDVLGLPQNTIKVGIMDEERRTTLNLKACIKAAADRVVFINTGFLDRTGDEIHT
SMEAGPMIRKGAMKSTDWIAAYENQNVDIGLETGLSGKAQIGKGMWAMTDLMADMVEQKIGQPKAGATTAWVPSPTAATL
HAMHYHQVDVFAVQSELAGKRRSTLDELLTIPLATELAWAPEEIREEVDNNCQSILGYVVRWIDAGVGCSKVPDIHDVAL
MEDRATLRISSQLLANWLRHGVITEEDVKTSLRRMAAVVDEQNAADPDFRPMASDPDNSIAFQAAQELILDGAAQPSGYT
EPILHRRRREYKAASNVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 58