|
Name : Mspyr1_39240 (Mspyr1_39240) Accession : YP_004078348.1 Strain : Mycobacterium gilvum Spyr1 Genome accession: NC_014814 Putative virulence/resistance : Unknown Product : arabinose efflux permease family protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 4076079 - 4077398 bp Length : 1320 bp Strand : - Note : PFAM: Major Facilitator Superfamily DNA sequence : ATGACCATAGCCACACCGTCGGACCCGGCGACCCTGCGCAGGGTGGCGTTGTCGAGCCTGCTCGGAACAGCCATCGAGTA CTACGACTTCCTGGTGTACGGCACGATGAGCGCGCTGGTGTTCGGCAGGGTGTTCTTCCCGGATTCCGATCCCGCGGTCG CGACCATCGCCGCATTCGGCACGCTGGCCGCCGGATACGTCGCCCGACCGGTCGGCGGCATCCTGTTCGGTCACTTCGGA GACCGTCTGGGACGCAAGCGAATGCTGGTTCTGACGATGGGCCTGATGGGCGCCGCGAGCTTCGCCATCGGACTGCTCCC GACGTTCGCCGCGGTCGGCGTGACGGCGCCACTGCTGCTCGTCGCTCTACGTGTGATCCAGGGGATCGCGATCGGCGGAG AGTGGGGCGGGGCCACCCTCATGGTCACCGAGCACGCCGAACCTCATCGCCGTGGATTCTGGAACGGTGTCATGCAGATG GGCTCACCCATCGGCTCACTGCTGTCGGTCACCGTCGTCACGGCGATCACGCTGCTGCCCGACGAGGCGTTCGTCTCCTG GGGATGGCGGGTGCCGTTCCTGCTCAGCGTGGTGCTGCTGGCGATCGGTGTCTACGTGCGCGTATCCATCACCGAGAGCC CCGTTTTCGAGCAGGCGAAACCGAAGGTTGTTGAGAGCAGGCGCATCCCGCTGATCGAGGTGCTGCGGCGGCCCCGCAAC CTGATCCTCGCCTGCGCGGTGGGCATCGGGCCGTTCGCGCTCACCGCCCTGATCAGCACCCACATGATCAGCTACGCCAC ATCGATCGGCTATCACCGCACCGATGTGATGACATCTCTGGTGTTCACCTCGCTGTCCGCGCTGATCGCCATCCCGGTGT TCTCCGCGCTGTCCGACCGGGTGGGGCGCCGACCGGTCATGCTGGTCGGCGGCGTCGCGATCATCTGCTACGCATGGCCG TTCTACTGGTTGGTGGACATGCGGGCGATGGCATGGCTGGTCGTCGCGATGATGGTCGCGCAGATCGTCCAGTCGTTGAT GTACGCACCGCTGGGCGCGCTGTACTCCGAGATGTTCGGAACCACGGTGCGCTACACCGGAGCCTCCATGGGATATCAAC TTGCGGCATTGGTCGGTGCCGGATTCACCCCGATGATCGCCAGCAGCCTGCTCGTCGACGAGGTGACCAGTGTGCCGTTG GTGGTGCTGGCGATGGGTTGCGGCGCCGTCACCGTGCTCGCCGTCTGGCGGATCCGGGAGACCCAGGGTGTCGATTTGGC CGGCATCGACTCTGGGCGCAACGCGGTCCGTACACCGTGA Protein sequence : MTIATPSDPATLRRVALSSLLGTAIEYYDFLVYGTMSALVFGRVFFPDSDPAVATIAAFGTLAAGYVARPVGGILFGHFG DRLGRKRMLVLTMGLMGAASFAIGLLPTFAAVGVTAPLLLVALRVIQGIAIGGEWGGATLMVTEHAEPHRRGFWNGVMQM GSPIGSLLSVTVVTAITLLPDEAFVSWGWRVPFLLSVVLLAIGVYVRVSITESPVFEQAKPKVVESRRIPLIEVLRRPRN LILACAVGIGPFALTALISTHMISYATSIGYHRTDVMTSLVFTSLSALIAIPVFSALSDRVGRRPVMLVGGVAIICYAWP FYWLVDMRAMAWLVVAMMVAQIVQSLMYAPLGALYSEMFGTTVRYTGASMGYQLAALVGAGFTPMIASSLLVDEVTSVPL VVLAMGCGAVTVLAVWRIRETQGVDLAGIDSGRNAVRTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 2e-66 | 42 |
