Gene Information

Name : Mspyr1_49430 (Mspyr1_49430)
Accession : YP_004079312.1
Strain : Mycobacterium gilvum Spyr1
Genome accession: NC_014814
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 5127162 - 5127443 bp
Length : 282 bp
Strand : +
Note : PFAM: BMC domain

DNA sequence : 
ATGGCCAGCAACGCGATCGGAATGATCGAGACCAAGGGTTACGTCGCCGCGCTCGCAGCAGCCGACGCAATGGTCAAGGC
CGCGAACGTGACCATCACCGACCGCAAAGAGGTGGGTGACGGTCTGGTGGCCGTCATCGTCACCGGCGAGGTCGGCGCCG
TCAAGGCCGCCACCGAGGCGGGTGCCGAAACCGCTTCGCAGGTAGGCGAACTCGTCAGCGTGCACGTGATCCCGCGGCCG
CACAACGAGCTCGGCGCACACTTCTCCGTCGCCGCACAGTAG

Protein sequence : 
MASNAIGMIETKGYVAALAAADAMVKAANVTITDRKEVGDGLVAVIVTGEVGAVKAATEAGAETASQVGELVSVHVIPRP
HNELGAHFSVAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-09 55
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-10 54
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-10 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mspyr1_49430 YP_004079312.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 7e-10 55
Mspyr1_49430 YP_004079312.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 2e-10 54
Mspyr1_49430 YP_004079312.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 9e-11 50