Gene Information

Name : ML5_2027 (ML5_2027)
Accession : YP_004081705.1
Strain : Micromonospora sp. L5
Genome accession: NC_014815
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2091546 - 2092307 bp
Length : 762 bp
Strand : +
Note : KEGG: sro:Sros_0090 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGCCGGACCATCCGGGACGCACCATCGAACCGGCGTTACGTGTCGAACAACTCACCCGCGTGTACGGCACCGGCCGCAA
CCAGGTGACCGCGCTCGCGGGCGTCGATGTCGGCTTCGGCCGGGGGACCTTCACCGCGGTGATGGGCCCCTCGGGCTCCG
GCAAGAGCACGCTGTTGCAGATCGCGGCCGGGCTCGACCGCCCCACGAGCGGTCGGGTGATCCTCGGCGGCACCGACCTG
TCCGGGCTGTCCGAGACGCGCCTGACCGAGCTGCGTCGTACCCGGATCGGGTTCGTCTTCCAGGCGTTCAACCTGATCGG
CGCGCTCACCGTCGAGGAAAACATCGTGCTGCCCCTGCGTCTGGCCGGCGTCCGCCCGGACCGGGCCTGGCTGACCCACG
TGGTCGAGCGGGTCGGCCTCGCCGACCGGCTGCACCACCGGCCGGCGGCGCTGTCCGGCGGCCAGCAGCAGCGGGTGGCG
ATCGCCCGGGCGCTGGCCACCCGCCCCGAGGTGATCTTCTCGGACGAGCCCACCGGCGCCCTCGACTCGCGGACCGCGGC
GGAGGTGCTGACGCTGTTGCGCGCGGTCGTGGACGAGCACGGGCAGACGGTGGTGACGGTGACCCACGACCCGATCGCCG
CGTCGTACGCGGATCGGGTGCTCGTGCTGGCCGACGGTGCGATGGTCGCCGACCTCCCGCAGCTCGGAGCCGTCCGTATC
GCCGAGCACCTGGCCTCGCTGGACGGGCGGGTCCTCCGATGA

Protein sequence : 
MPDHPGRTIEPALRVEQLTRVYGTGRNQVTALAGVDVGFGRGTFTAVMGPSGSGKSTLLQIAAGLDRPTSGRVILGGTDL
SGLSETRLTELRRTRIGFVFQAFNLIGALTVEENIVLPLRLAGVRPDRAWLTHVVERVGLADRLHHRPAALSGGQQQRVA
IARALATRPEVIFSDEPTGALDSRTAAEVLTLLRAVVDEHGQTVVTVTHDPIAASYADRVLVLADGAMVADLPQLGAVRI
AEHLASLDGRVLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-35 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ML5_2027 YP_004081705.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-46 48
ML5_2027 YP_004081705.1 ABC transporter-like protein NC_008702.1.4606598. Protein 7e-36 48
ML5_2027 YP_004081705.1 ABC transporter-like protein CP001581.1.gene798.p Protein 4e-42 46
ML5_2027 YP_004081705.1 ABC transporter-like protein NC_012469.1.7686878. Protein 5e-41 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ML5_2027 YP_004081705.1 ABC transporter-like protein VFG2059 Protein 1e-13 41