Gene Information

Name : Astex_R0001 (Astex_R0001)
Accession : -
Strain :
Genome accession: NC_014816
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 553109 - 554557 bp
Length : 1449 bp
Strand : +
Note : RNAmmer 1.2, Lagesen et al., Nucleic Acids Res. Apr 22, 2007

DNA sequence : 
AGAGTTTGATCCTGGCTCAGAGCGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGAAGTCTTCGGACTTAGTGG
CGGACGGGTGAGTAACACGTGGGAACGTACCTTTTGGTTCGGAACAACTCAGGGAAACTTGAGCTAATACCGGATGAGCC
CTTAGGGGGAAAGATTTATCGCCGAAAGAGCGGCCCGCGTTAGATTAGCTAGTTGGTGAGGTAAAGGCTCACCAAGGCTA
CGATCTATAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTG
GGGAATCTTGCGCAATGGGCGAAAGCCTGACGCAGCCATGCCGCGTGAATGATGAAGGTCTTAGGATTGTAAAATTCTTT
TACCAGGGACGATAATGACGGTACCTGGAGAAAAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGG
CTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGAGCGTAGGCGGGTTGACAAGTTGGAGGTGAAAGCCCAGGGCTCAACC
CTGGAATTGCCTTCAAAACTGTCAGCCTTGAGTATGGAAGAGGTAAGTGGAACTCCGAGTGTAGAGGTGAAATTCGTAGA
TATTCGGAAGAACACCAGTGGCGAAGGCGACTTACTGGTCCATGACTGACGCTGAGGCTCGAAAGCGTGGGGAGCAAACA
GGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGATTGCTAGTTGTCGGGCAGTATACTGTTCGGTGACGCAGCTAA
CGCAATAAGCAATCCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGG
AGCATGTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCACCTTTTGACATGCCCGGCTAACCAGAGAGATTTGGTGTT
CCCTTCGGGGACCGGGACACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGA
GCGCAACCCTCGCTGTTAGTTGCCATCATTTAGTTGGGAACTCTAACAGGACTGCCGGTGCTAAGCCGGAGGAAGGTGGG
GATGACGTCAAGTCCTCATGGCCCTTACGGGGTGGGCTACACACGTGCTACAATGGCGACTACAGAGGGAAAATCCCTAA
AAGTCGTCTCAGTTCGGATTGTCCTCTGCAACTCGAGGGCATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGCCG
CGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTTGGGTTTACCCGAAGGTCGTGCGCTAAC
CGCAAGGAGGCAGCGAACCACGGTAGGCTCAGCGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCT
GGATCACCT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-120 88.2
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-120 88.2
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-120 88.2
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-120 88.2
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-120 88.2
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-120 88.2