Gene Information

Name : Tmar_1997 (Tmar_1997)
Accession : YP_004102806.1
Strain : Thermaerobacter marianensis DSM 12885
Genome accession: NC_014831
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2401018 - 2401707 bp
Length : 690 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439: IPR017911: IPR017871; KEGG: srm:SRM_03064 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: ABC trans

DNA sequence : 
ATGGCGCTGATCGAACTGCAAGGCGTGGAGAAGGTCTACCGCATGGGCCAAGGGCGCGTGACGGCCCTGGGCGGGGTCGA
CCTCACCGTCGACGAAGGCGAGTTCACCGCGGTGATGGGCCCTTCCGGGTCCGGGAAGTCGACGCTGATGCACATCATCG
GATGCCTCGACCGTCCCACCGCCGGATCCTACCGGTTCATGGGACGCGAGGTCGGCGGGCTCAGCGAGACGGAACTGGCC
CGCTTGCGGAACCGCCAGTTTGGGTTCGTCTTCCAGCGTTTCTTTCTCCTCCCCCGGTACCGGGTGTGGGAGAACGTGGC
CTTGCCCCTGGCCTACGCCGGCGTCGACCGGCGCCGGCGCCGGGAACGGGCGTGGGAACTCCTCAACCGGGTCGGCCTGG
AGGGCCGGGAGGAGCACTTCCCCAACCAGCTGTCCGGAGGACAGCAGCAGCGGGTGGCCATCGCCCGGGCCCTGGCCAAC
AGACCGGCGGTCCTGCTGGCCGATGAGCCGACGGGCAACCTGGACAGCGTCACGAGCGCCGAGATTCTCGCGCTTTTCGC
GACCCTCCACCGGCAGGGCCATACCATTCTGCTGGTGACCCACGACCCGGCGGTCGCCCAGCAGGCCCGGCGCGTGGTGT
ACATCCGGGACGGCCGAATCCAGCAGGACGAACGCCGCGAGGCGCGATGA

Protein sequence : 
MALIELQGVEKVYRMGQGRVTALGGVDLTVDEGEFTAVMGPSGSGKSTLMHIIGCLDRPTAGSYRFMGREVGGLSETELA
RLRNRQFGFVFQRFFLLPRYRVWENVALPLAYAGVDRRRRRERAWELLNRVGLEGREEHFPNQLSGGQQQRVAIARALAN
RPAVLLADEPTGNLDSVTSAEILALFATLHRQGHTILLVTHDPAVAQQARRVVYIRDGRIQQDERREAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-35 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-33 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tmar_1997 YP_004102806.1 ABC transporter NC_012469.1.7686878. Protein 2e-55 54
Tmar_1997 YP_004102806.1 ABC transporter NC_008702.1.4606598. Protein 1e-45 53
Tmar_1997 YP_004102806.1 ABC transporter CP001581.1.gene598.p Protein 4e-40 43
Tmar_1997 YP_004102806.1 ABC transporter CP001581.1.gene798.p Protein 1e-38 43