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Name : Rpdx1_1301 (Rpdx1_1301) Accession : YP_004107657.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Unknown Product : FAD linked oxidase domain-containing protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 1377496 - 1378989 bp Length : 1494 bp Strand : + Note : PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_1662 glycolate oxidase, subunit GlcD DNA sequence : ATGACCATTCTGATGCCGGAGCCGGACCAGTCGGTGCTGGCGCGCCGCGACGAGATCATTGCGGCCTTGCGCAGGATCGT GACGGGCGAGGGCGTGATCTCCAGCGCTGCCGAAATGAAACCCTATGAGTCCGATGGCCTTATGGCGTATCGGCAGCCGC CGATGGTGGTGGTGCTGCCGAGCACGACCAAACAGGTGTCGGAGGTGCTGTGCTATTGCCACCAGAACGGCATCAAGGTG GTGCCGCGCGGCTCCGGCACCTCGCTGTCCGGCGGGGCGCTGCCGCTCGCCGACGGCGTGTTACTCGGTCTCGGCAAGTT CAAGCGGATTCGCGAGATCGACTTCGACAACCGCGCCGTGGTTGTCGAGCCCGGCGTTACCAATCTGGCGATCAGCCAGG CGGTCGATCACGCCGGGTTCTACTACGCGCCCGACCCGTCGTCGCAGATCGCCTGTTCGATCGGCGGCAACATCGCCGAG AATTCCGGCGGCGTGCACTGCCTGAAATACGGCATGACCACCAACAACGTGCTCGGCTGCGAGATCGTGCTGATGACCGG TGAGATCCTGCGGATCGGTGGCAAGGCAGCGGAATGCGCCGGCTACGATCTGATGGGCGTGATCACCGGCTCCGAAGGAT TGCTCGGTGTCATCACCGAAGTCACCGTGCGCATCCTGCGCAAACCGGAAACGGCGCGGGCCCTGATGATCGGCTTCCAG AGCGTCGAGGCCGCCGGCCAGTGCGTAGCCGACGTGATCAGCGCCGGTATCATTCCGGGCGGCATGGAGATGATGGACAA GCCGGCGATCCACGCTGCGGAAGCGTTCGTTCACGCCGGCTATCCGCTCGACGTCGAAGCGCTGTTGATCATCGAGCTCG ACGGTCCGCAGGTCGAGGTCGACGAACTGATCGGCCGGGTCGAGGCGATCGCGCTGCAATGCGGATCGACCACCTGCCAG ATCTCCACCAGCGAGCAGCAGCGGCTCTTGTTCTGGTCCGGCCGCAAGGCGGCGTTCCCGGCGGTGGGCCGGATCTCGCC GGACTATCTGTGCATGGACGGCACCATCCCGCGCGCCCAGTTGCCGCTGGTGCTGCGGCGGATGAACGAGATGTCGGAGA AATACGGCCTGCGCGTCGCCAACGTGTTCCACGCCGGCGACGGCAATCTGCATCCGCTGATCCTGTACGATGCCAACAAG CCCGGCGAGCAGGACGCCGCCGAAGCGTTCGGCGCCGACATCCTGCGGCTGTGCGTCGAGGTCGGCGGCGTGCTCACCGG CGAGCACGGAGTTGGGATCGAAAAGCGCGACCTGATGCCGGAGATGTTCTCGGACATCGACCTCAACCAGCAGCAGCGGC TGAAATGCGCGTTCGATTCCGAGGGCCTGCTCAACCCCGGCAAGGTGTTCCCGACGCTGCACCGCTGCGCCGAGCTCGGC CGCATGCACGTGCACAAGGGGCTGTTGCCGTTCCCCGATATTCCGCGGTTCTGA Protein sequence : MTILMPEPDQSVLARRDEIIAALRRIVTGEGVISSAAEMKPYESDGLMAYRQPPMVVVLPSTTKQVSEVLCYCHQNGIKV VPRGSGTSLSGGALPLADGVLLGLGKFKRIREIDFDNRAVVVEPGVTNLAISQAVDHAGFYYAPDPSSQIACSIGGNIAE NSGGVHCLKYGMTTNNVLGCEIVLMTGEILRIGGKAAECAGYDLMGVITGSEGLLGVITEVTVRILRKPETARALMIGFQ SVEAAGQCVADVISAGIIPGGMEMMDKPAIHAAEAFVHAGYPLDVEALLIIELDGPQVEVDELIGRVEAIALQCGSTTCQ ISTSEQQRLLFWSGRKAAFPAVGRISPDYLCMDGTIPRAQLPLVLRRMNEMSEKYGLRVANVFHAGDGNLHPLILYDANK PGEQDAAEAFGADILRLCVEVGGVLTGEHGVGIEKRDLMPEMFSDIDLNQQQRLKCAFDSEGLLNPGKVFPTLHRCAELG RMHVHKGLLPFPDIPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 3e-135 | 57 |
