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Name : Rpdx1_3581 (Rpdx1_3581) Accession : YP_004109883.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 3839370 - 3841352 bp Length : 1983 bp Strand : - Note : KEGG: nwi:Nwi_1193 cytochrome c-type biogenesis protein CcmF; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein DNA sequence : ATGATCGCCGAGGCAGGGCACTACGCACTCGTCCTGGCGCTCGCTCTGGCGCTGATCCAGTCCACCGTGCCGGTGCTCGG CGCGCGTCTCAACGACGGCGGCCTGATGAACGTCGCGCGCTCGACCGCGCTGGTGCAGTTCGTCTTCGTCGCCGCGTCGT TCGGCGCGCTGGTGTGGCTCAACGTCACCTCCGATTTCTCGGTGGTGAACGTCTACGAGAACTCGCACTCGATGAAGCCG CTGCTCTACAAGATCACCGGCGTGTGGGGAAACCACGAAGGCTCGATGCTGCTGTGGGTGGCGATCCTGGCGCTGTTCGG CGCGCTGGTCGCCGCGCTCGGCAGCAACCTGCCGCTGTCGCTGCGCGCCCACGTGCTGGCGGTGCAGGGCTGGATCGCGA CCGCGTTCTATCTGTTCATCCTGATCACCTCGAACCCGTTCCTGCGGATTCCCAATCCGCCGATGGAAGGCCGCGATCTC AATCCGGTGCTGCAGGACATCGGTCTCGCGCTGCATCCGCCGCTGCTGTATCTCGGCTATGTCGGGTTCTCGATCTCGTT CTCGTTCGCCGCCGCGGCGCTGATCGAAGGCCGGCTCGACGCCGCCTGGGCGCGCTGGGTGCGGCCGTGGACGCTGATCG CCTGGGTCTGCCTCACCCTCGGCATCGCGATGGGCTCGTATTGGGCCTACTACGAACTCGGCTGGGGCGGCTGGTGGTTC TGGGACCCGGTCGAAAACGCCTCGCTGATGCCGTGGCTCGCCGGCATCGCGCTGCTGCATTCGGCGCTGGTGATGGAGAA GCGCAACGCGCTGAAGGTCTGGACCATCCTGCTGTCGATCCTGACCTTCTCGCTGTCGCTGCTCGGCACCTTCCTGGTCC GCTCCGGCGTGCTGACCTCGGTGCACGCCTTCGCCACCGATCCCAGCCGCGGCGTGTTCATCCTGGTGATCCTGTGCGTG TTCATCGGCGGCAGCCTGACGCTGTTCGCCTGGCGCGCCTCGGCGCTGAAGCAGGGCGGACTGTTCGCGCCGATCTCGCG CGAGGGCTCGCTGGTCCTGAACAACCTGTTCCTGACCACCGCCTGCGCCACGGTGTTCGTCGGCACGCTGTATCCACTGG CGCTGGAAGTGCTGACCGGCGACAAGATCTCGGTCGGCGCGCCGTTCTTCAATCTCACTTTCGGTCCGCTGATGGTGCCG CTGCTGGTCGCTGTGCCGTTCGGTCCGCTGCTGGCCTGGAAGCGCGGCGATCTGGTCGCCGCGGCGCAGCGGCTGATCGC CGCCGGCGTGGTGGCGCTGCTGGCCGTCGCCTTCGTCTACGCCTGGGTCCATGGCGGCGCGGTGCTGGCGCCGCTGGCCA TCGGCCTTGCGGTGTTCGTGATCATCGGCGCGCTGGTCGATATCGTCGAGCGCATCGGCCTGTTCCGCAATCCGCTGTCG ATCTCGCTGCGCCGCGCCGCCGGCCTGCCGCGCTCGGCCTGGGGCACGATGTTCGCCCATGCGGCGCTCGGCGTGACGCT GATCGGCATCGTCTGCGAGAGCACCTGGAACACCGAATACATCGCCGCGATGAAGCCCGGCGACAGCACCAGGCTCGCCG GCTACGAATTCAAATTCGAGGGCGCCAATCAGCGCCAGGGGCCGAACTATCGCGAACTGCTGACGCGGTTCACCGTCACC GAGGGCGGCCGGCCGGTCGGCGTGATGACGCCGTCGAAACGCAGCTTCGTCACCCGCGGCACCTCGACCACCGAAGCAGC GCTGCTGACCCGCGGCCTCAGCCAGCTCTACGTCTCGCTCGGCGATCTCAACGATCAGGGCGCCGTGACGGTGCGGATGT ATCACAAGCCGATGGTGCTGCTGATCTGGTTCGGCCCGCTCCTGATGGCGCTGGGCGGCGTCCTGTCGCTGTCCGATCGC CGGCTCCGGGTCGGCGCACCGAAGCCCGCCAAAGCGCCGCGCGCGCTGCAGCCGGCGGAGTAG Protein sequence : MIAEAGHYALVLALALALIQSTVPVLGARLNDGGLMNVARSTALVQFVFVAASFGALVWLNVTSDFSVVNVYENSHSMKP LLYKITGVWGNHEGSMLLWVAILALFGALVAALGSNLPLSLRAHVLAVQGWIATAFYLFILITSNPFLRIPNPPMEGRDL NPVLQDIGLALHPPLLYLGYVGFSISFSFAAAALIEGRLDAAWARWVRPWTLIAWVCLTLGIAMGSYWAYYELGWGGWWF WDPVENASLMPWLAGIALLHSALVMEKRNALKVWTILLSILTFSLSLLGTFLVRSGVLTSVHAFATDPSRGVFILVILCV FIGGSLTLFAWRASALKQGGLFAPISREGSLVLNNLFLTTACATVFVGTLYPLALEVLTGDKISVGAPFFNLTFGPLMVP LLVAVPFGPLLAWKRGDLVAAAQRLIAAGVVALLAVAFVYAWVHGGAVLAPLAIGLAVFVIIGALVDIVERIGLFRNPLS ISLRRAAGLPRSAWGTMFAHAALGVTLIGIVCESTWNTEYIAAMKPGDSTRLAGYEFKFEGANQRQGPNYRELLTRFTVT EGGRPVGVMTPSKRSFVTRGTSTTEAALLTRGLSQLYVSLGDLNDQGAVTVRMYHKPMVLLIWFGPLLMALGGVLSLSDR RLRVGAPKPAKAPRALQPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 7e-106 | 46 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-82 | 46 |
