Gene Information

Name : Rpdx1_0412 (Rpdx1_0412)
Accession : YP_004106786.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Virulence
Product : oxidoreductase molybdopterin-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2041
EC number : -
Position : 447351 - 448130 bp
Length : 780 bp
Strand : -
Note : PFAM: oxidoreductase molybdopterin binding; KEGG: nha:Nham_3598 oxidoreductase, molybdopterin binding

DNA sequence : 
ATGCTGCGCATCAACAAACTGCTGATCCCGGGCGTCGACAAGCAACTGCTGGTTCGCGACGCCGCCAGGCTGATGCCCGA
CGTGTCGCGGCGACGCTTCCTCGCCGGCGGCGCCAGCCTCGGCGCGCTGACGCTGCTGACCGGATGCGACGTCGTCGATG
GCGCCTCGGCCGAGACGCTGCTCGCCAAGGTGTCGAAGTTCAACGACGCCGTGCAGGCAGCGATCTTCGATCCGAACACG
CTGGCGCCGACCTTCAGCGAAAGCGACATCACCCGGCCGTTCCCGTTCAACGCCTACTACGCGCTCGACCAGGCACCGAC
GATCGACGGGGGCGACTGGAAGCTGGAAGTGTCCGGCCTGGTCCAGAACAACAAGAGCTGGACGCTGCAGGAGCTGACGC
AGCTACCCGAGGTATCGCAGATCACCCGTCACGTCTGCGTCGAAGGCTGGAGCGCGATCGGCCAGTGGAGCGGCGTGCGG
CTGCGCGATTTCCTCGAGCTGATCGGCGCAGACACCAAGGCGAACTACGTCTGGTTCCGCTGCGCCGACGATTACACCTC
GCCGATCGACATGCCGACTGCGCTGCATCCGCAGACCCAGATAACCTTCAAGTTCGGCGGCGAGGTGCTGCCGCGCGCCT
ACGGCCACCCTATGAAGATCCGGATCCCGACCAAGCTCGGCTTCAAGAATCCGAAATACGTCGTGTCGATGGAAGTCACC
AACGACTACAAGGGCGGCTATTGGGAAGACCAGGGCTACAACTCGTTCAGCGGATTGTAG

Protein sequence : 
MLRINKLLIPGVDKQLLVRDAARLMPDVSRRRFLAGGASLGALTLLTGCDVVDGASAETLLAKVSKFNDAVQAAIFDPNT
LAPTFSESDITRPFPFNAYYALDQAPTIDGGDWKLEVSGLVQNNKSWTLQELTQLPEVSQITRHVCVEGWSAIGQWSGVR
LRDFLELIGADTKANYVWFRCADDYTSPIDMPTALHPQTQITFKFGGEVLPRAYGHPMKIRIPTKLGFKNPKYVVSMEVT
NDYKGGYWEDQGYNSFSGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42042.1 hypothetical protein Not tested PAI II 536 Protein 6e-62 53
c3567 NP_755442.1 hypothetical protein Not tested PAI I CFT073 Protein 7e-60 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpdx1_0412 YP_004106786.1 oxidoreductase molybdopterin-binding protein VFG1561 Protein 3e-62 53
Rpdx1_0412 YP_004106786.1 oxidoreductase molybdopterin-binding protein VFG1704 Protein 3e-60 52