Gene Information

Name : Rpdx1_4436 (Rpdx1_4436)
Accession : YP_004110720.1
Strain : Rhodopseudomonas palustris DX-1
Genome accession: NC_014834
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : 2.3.3.9
Position : 4768245 - 4770419 bp
Length : 2175 bp
Strand : +
Note : TIGRFAM: malate synthase G; KEGG: bra:BRADO1059 malate synthase G; PFAM: Malate synthase family protein

DNA sequence :
ATGAATCGTATTGATGCCCACGGACTGAAAATCGCTCCTGTGCTGTTCGACTTCATCGCCAAGGAAGCCGCGCCGAAAAC
CGGCATCGCTGCCGACGTATTTTGGGCCGGGCTCGCTGCGATCGTTCGTGATCTGGCGCCGAAGACCCGCGCGCTGCTGA
AGACCCGCGACGACCTTCAGGCCAAGATCGACGCCTGGCATCTCGCCAACAAGGGCAAGAAGCAGGACATGGCGGCCTAC
ACCGCGTTCCTGAAGGAGATCGGCTACCTGCTGCCGGAGCCGGCGACCGCTCCGGTCCAGACCGCCAATGTCGACGAGGA
AATCGGCAAGCTGTGCGGTCCGCAGCTCGTGGTGCCGCTGTCGAATGCGCGCTACGCGCTGAACGCCGCCAATGCGCGCT
GGGGTTCGCTGTACGACGCGTTCTACGGCACCGATGCGATCCCGCAGGAAGCCACCCAGGCCAAGGGCTACGACAAGGCG
CGCGGCGACAAGGTGATCGCCAAGGCCAAGGCATTCCTCGACGGGGCAGCGCCGCTCGCCACCGGCAGCCACAGCGACGT
CACCGCCTACAGCGTGATCGCCGGCCAGCTCTCGGCCAAGCTGAAGAGCGGCAATGCCGCCGGCCTGAAGAAGCCCGAGC
AGTTCGCCGGCTATAACGGCGATGCGGCCTCGCCGAGCGCCGTGCTGCTGGTCAACAACGGCCTGCACATCGAGATCAAG
ATCGACCGCGCCAACACCATCGGCAAGGACGATCCGGCCGGCGTCGCCGACCTGATCATCGAGTCGGCGGTGTCGACCAT
TCTCGACATGGAAGACTCGGTCGCCGCCGTCGACGCCGACGACAAGGTGCTGATCTATCGCAACACCCTCGGGCTGATGG
ACGGCACGCTGTCGGAAAGCTTCGAGAAGGGCGGCAAGACCGTCACCCGCGCGCTCAACGGCGACCGCAGCTACACCGGC
GCCGACGGCAAGCAGATCACGCTGCACGGGCGCAGCCTGCTGCTGATGCGCAACGTCGGCCACCACATGTGGACCGACGC
GGTGCTCGACAGCGAAGGTCAGGAGATCCCGGAAGGCTTCCTCGACGCCGCGGTGTCGGGTCTGATCGCGATCCACGATC
TCAAGCACCTCGGCAACACCCGCAACAGCCGCACCGGCTCGGTCTACATCGTCAAGCCGAAGATGCACGGCCCGGATGAA
GTCGCCCTCACGGTCGAGCTGTTCGGTCGCGTCGAGACCATGCTCGGCCTGACCGAGAACACGCTGAAGGTCGGCATCAT
GGACGAGGAGCGCCGCACCACGGTGAACCTCAAGGCCTGCATCCAGAACGCGTCCAAGCGGATCGTATTCATCAACACGG
GATTCCTGGACCGCACCGGCGACGAGATCCACACCTCGATGGAAGCGGGTCCGATGATCCGCAAGAACGAGATGAAGGCG
CAGCCCTGGATCAAGGCCTATGAGGACTGGAACGTCGACACCGGTCTGGTCGACGGCCTGCCCGGCCATGCCCAGATCGG
CAAGGGCATGTGGGCAGCGCCCGACAAGATGGCCGACATGCTGGCGCAGAAGATCGGCCATCCGCAGGCCGGCGCCACCA
CCGCCTGGGTGCCGTCGCCGACCGCCGCGACCCTGCACGCCCTGCACTATCACCAGGTCGACGTGATCGCGCGGCAGCAG
GAGCTGGCCAAGGGCGGCCCGCGCGCCAAGCTCGAGGACATCCTCACCATCCCGGTGTCGAACTCGAACTGGGCGCCGGA
CGATGTCCGTCAGGAGATCGACAACAACTGTCAGGGCATTCTCGGCTACGTGGTGCGCTGGATCGACCAGGGCGTCGGCT
GCTCCAAGGTGCCGGACATCCACGACGTCGGCCTGATGGAAGACCGCGCCACGCTGCGGATCTCCAGCCAGCACCTCGCC
AACTGGCTGCATCACGGCGTCGTCACCAAGGAGCAGGTGCTCGACTCGCTGAAGCGGATGGCGGTGGTGGTCGACAAGCA
GAACGAAGGCGATCCGCTGTACCGGCCGATGGCGCCGGATTTCGACGGCGTCGCGTTCGAAGCCGCCTGCGACCTGATCT
TCAAGGGCCGCGCCCAGCCGAACGGCTACACCGAGTTCATCCTGCATGAACGCCGCCGCGAGGCGAAGGCGGCGCATCTG
GAAACGCTGCGCTAG

Protein sequence :
MNRIDAHGLKIAPVLFDFIAKEAAPKTGIAADVFWAGLAAIVRDLAPKTRALLKTRDDLQAKIDAWHLANKGKKQDMAAY
TAFLKEIGYLLPEPATAPVQTANVDEEIGKLCGPQLVVPLSNARYALNAANARWGSLYDAFYGTDAIPQEATQAKGYDKA
RGDKVIAKAKAFLDGAAPLATGSHSDVTAYSVIAGQLSAKLKSGNAAGLKKPEQFAGYNGDAASPSAVLLVNNGLHIEIK
IDRANTIGKDDPAGVADLIIESAVSTILDMEDSVAAVDADDKVLIYRNTLGLMDGTLSESFEKGGKTVTRALNGDRSYTG
ADGKQITLHGRSLLLMRNVGHHMWTDAVLDSEGQEIPEGFLDAAVSGLIAIHDLKHLGNTRNSRTGSVYIVKPKMHGPDE
VALTVELFGRVETMLGLTENTLKVGIMDEERRTTVNLKACIQNASKRIVFINTGFLDRTGDEIHTSMEAGPMIRKNEMKA
QPWIKAYEDWNVDTGLVDGLPGHAQIGKGMWAAPDKMADMLAQKIGHPQAGATTAWVPSPTAATLHALHYHQVDVIARQQ
ELAKGGPRAKLEDILTIPVSNSNWAPDDVRQEIDNNCQGILGYVVRWIDQGVGCSKVPDIHDVGLMEDRATLRISSQHLA
NWLHHGVVTKEQVLDSLKRMAVVVDKQNEGDPLYRPMAPDFDGVAFEAACDLIFKGRAQPNGYTEFILHERRREAKAAHL
ETLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 61