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Name : Rpdx1_0596 (Rpdx1_0596) Accession : YP_004106967.1 Strain : Rhodopseudomonas palustris DX-1 Genome accession: NC_014834 Putative virulence/resistance : Unknown Product : FAD linked oxidase domain-containing protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 640130 - 641566 bp Length : 1437 bp Strand : + Note : PFAM: FAD linked oxidase domain protein; KEGG: ret:RHE_CH00808 glycolate oxidase subunit D protein DNA sequence : ATGAGCAAAATTAGGTTCACCGAACCAAATCGAGAAATCCTCGCGCGCCGAGATTCAATCATAAACGATCTAACCCGCCT TGTTGACCCCGCTGGGCTAATAACGTCGACGGACGAGTGTCGGGCTTATGAGACAGATGCGTTGACGGCCTATCGCAAGA TGCCGCTCGCCGTCGTCCTACCGAAGACGACCGAAGAGGTGAGTGCCGTTTTGAAATACTGTCACGACACCGGCGTCAAG GTCGTGCCGCGCGGCGCAGGTACGTCTCTCGCCGGCGGGGCAATTCCGAGTGAAGACGCCGTCGTTCTCGGACTTTCAAA GATGAATCGGGTGCTCGCGGTCAACTACGATGACCGCTTCATCCGCGTCGAAGCGGGAGTCACAAATTTGAGCGTAACGG CGGTGGTGGCGGAGAACGGCTTCTTCTATGCGCCAGACCCTTCCTCTCAACTTGCCTGCACGATCGGAGGCAACATTGCC AACAACTCCGGAGGCGCGCATTGCCTGAAGTATGGAGTCACGACCAATAACCTCCTCGGCGTAAGGATGGTACTGATCGA TGGATCGATCATCGATCTCGGCGGTGACTATCTCGATAGCGCTGGACTCGATCTGCTGGGCCTGGTCGTCGGCTCCGAGG GGCAGCTCGGGATAGTGACCGAAGCGACCCTCCGAATTCTGAAATCGGCCGAGGGAGCGCGCCCGGTTCTGTTCGGTTTC CCGTCTTGCGAGGGAGCGGGCAAGGCGGTTGCGGACGTCATTGCCGCCGGTATCATTCCCGTAGCCATCGAATACATGGA CAAGGCCGCCATCGAGATCTGCGAGGCCTTCGCCAAGGCCGGCTATCCGCTCGATGTCGAGGCCCTTCTGATTGTAGAGG TCGAAGGGTCCGACGCCGAGATGGACGCGACGCTGGCGGACATCACCGCCATCGCTCGTGCGAATGGTGCGACGACAGTG CGCGAGAGCAGGTCGGCAATTGAGACGGCGGCAATCTGGAAGGGGCGGAAGTCGGCTTTCGGTGCGACCGGGCGAGTCGC TGACTATTTGTGCATGGACGGCACGGTGCCGACCGGCAAGCTGTCGTACGTTTTGGCGGAGATCTCCAAGATCGTACAGC GACACGGATTGCGTGTCGCGAATGTTTTCCATGCCGGTGACGGCAACATGCATCCGCTCATCCTCTACAACGCGAACGAT CCGTCGCAGCAGTCGAAGGCGGAAGCAGCGGGAGATGACATTCTCAGGCTCTGCGTTGAAGTTGGTGGGTGCCTGACGGG CGAGCACGGTGTCGGTATCGAGAAGCGTGATCTAATGCGCTGCCAGTTTGACGATGCCGATCTGGCTCAACAGATTCGGG TGCGCGCCGCGTTCGATCCGCGATGGCTGCTCAATACGGATAAGGTGTTTCCCCTCGATTTTCGATGTCAAGGTTAG Protein sequence : MSKIRFTEPNREILARRDSIINDLTRLVDPAGLITSTDECRAYETDALTAYRKMPLAVVLPKTTEEVSAVLKYCHDTGVK VVPRGAGTSLAGGAIPSEDAVVLGLSKMNRVLAVNYDDRFIRVEAGVTNLSVTAVVAENGFFYAPDPSSQLACTIGGNIA NNSGGAHCLKYGVTTNNLLGVRMVLIDGSIIDLGGDYLDSAGLDLLGLVVGSEGQLGIVTEATLRILKSAEGARPVLFGF PSCEGAGKAVADVIAAGIIPVAIEYMDKAAIEICEAFAKAGYPLDVEALLIVEVEGSDAEMDATLADITAIARANGATTV RESRSAIETAAIWKGRKSAFGATGRVADYLCMDGTVPTGKLSYVLAEISKIVQRHGLRVANVFHAGDGNMHPLILYNAND PSQQSKAEAAGDDILRLCVEVGGCLTGEHGVGIEKRDLMRCQFDDADLAQQIRVRAAFDPRWLLNTDKVFPLDFRCQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 1e-95 | 49 |
