Gene Information

Name : Selin_1962 (Selin_1962)
Accession : YP_004113245.1
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 2155147 - 2155605 bp
Length : 459 bp
Strand : -
Note : KEGG: bja:blr1316 ribonuclease H; PFAM: ribonuclease H

DNA sequence :
TTGAAGCACGTTACCATGTATACTGACGGCTCCTGTCTGGGGAATCCAGGCCCGGGAGGCTATGCCGCTATTCTCCACTA
TCAGGATAATCGCGGTGCTGAACACGAGCGCATCATTTGTGGATCTGCAGAGCATACGACTAATAATCAGATGGAACTGA
TGGCGGTAATCGAAGGGCTTCGCGCCCTGAAATCCCCATGCCGCGTCGATATTTATACGGACTCAAACTATGTGCGCCAG
GGGATCACGGCCTGGATATTCCAGTGGAAGCGCAATGGCTGGAAGACGGCGGGCAGGAAGCCGGTTGCCAACCGGGAGCT
GTGGGAAGAACTGGACTCCCTGATAGCGCAGCACCAGATCCAATGGCATTGGGTCAAAGGACACAGCGGGCATGAAATGA
ACGAGCGATGCGATGACATTGCGCGCCAGCAGGCCCAGCAGATGAAAGACCAGATGTAA

Protein sequence :
MKHVTMYTDGSCLGNPGPGGYAAILHYQDNRGAEHERIICGSAEHTTNNQMELMAVIEGLRALKSPCRVDIYTDSNYVRQ
GITAWIFQWKRNGWKTAGRKPVANRELWEELDSLIAQHQIQWHWVKGHSGHEMNERCDDIARQQAQQMKDQM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 3e-38 54