Gene Information

Name : Selin_R0048 (Selin_R0048)
Accession : -
Strain : Desulfurispirillum indicum S5
Genome accession: NC_014836
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2335868 - 2337375 bp
Length : 1508 bp
Strand : -
Note : RNAmmer 1.2, Lagesen et al., Nucleic Acids Res. Apr 22, 2007

DNA sequence :
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAAGTCAAGGGGCCTTTCGGGGCCACTGGC
GCACGGGTGAGTAACACGTGGGTAATCTGCCCTTTGGCCCGGGATAACATCTGGAAACGGATGCTAATACCGGATAATCT
CTTTTGAGCAAATGGAGCTTTCGGGTTCCGCCGAAGGATGAGCCCGCGCATGATTAGCTTGTTGGTGGGGTAACGGCCCA
CCAAGGCGAAGATCATTAGCCGGCCTGAGAGGGTGAACGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAG
GCAGCAGTGGGGAATATTGCGCAATGGACGTAAGTCTGACGCAGCAACGCCGCGTGGATGACGAAGGCTTTCGGGTCGTA
AAGTCCTTTAGATGGTGAAGAACCGGTACGGGAGTAACTGCCCGTGCCCTGACGGTAGCCATAGAATAAGCTCCGGCTAA
ATCCGTGCCAGCAGCCGCGGTAATACGGATGGAGCAAGCGTTGTCCGGAATCATTGGGCGTAAAGGGTGCGTAGGCGGTT
TTTTAAGTCTGCATTGTAAGTTCAGTGCTTAACGCTGAAATTGGTGCGGAAACTGGAAGACTTGAGTACTGTAGGGGAAA
GCGGAATGCCCTGTGTAGAGGTGAAATTCGTAGATATAGGGTGGAACATCAAAAGCGAAGGCAGCTTTCTGGGCAGTAAC
TGACGCTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGGATGCTAGA
TGTTGGCGGGAATCTTCCTGTCAGTGTCGGAGCTAACGCAATAAGCATCCCGCCTGGGGAGTACGGTCGCAAGGCTGAAA
CTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCTGGT
CTTGACATCCCGATGCCGTATTCAGAGATGTATATTTCCCTTCGGGGACATCGGTGACAGGTGCTGCATGGCTGTCGTCA
GCTCGTGTCGCGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCCATTAGTTGCCATCATTAAGTTGGGCACT
CTAGTGGGACAGCCGGAGTAATCCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTATGACCAGGGCTACACA
CGTGCTACAATGGCAAGGACAACGGGATGCGACCTCGCGAGAGTGAGCCAACCTCAAAAACCTTGTCTTAGTTCGGATTG
CAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCAGGTCAGCATACTGCGGTGAATACGTTCCCGGGCC
TTGTACACACCGCCCGTCACACCACGAAAGTCGGTTTTGCCAGAAGCGGGTGACCGAATCTTCGGATAGGAGCCTTCGAA
GGCAGGACTGGTGATTGGGGTGAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-115 86.9
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-115 86.9
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-199 84.9
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-199 84.9
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-199 84.6
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-199 84.6