Gene Information

Name : Pat9b_1308 (Pat9b_1308)
Accession : YP_004115185.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1462483 - 1462704 bp
Length : 222 bp
Strand : -
Note : TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; KEGG: spe:Spro_1672 cold-shock DNA-binding domain-containing protein; SMART: Cold shock protein

DNA sequence :
ATGGAGACGGGTACTGTTAAATGGTTCAATAACGCCAAAGGCTTCGGCTTTATCTGTCCGATTGGCGGCGGCGACGATAT
CTTCGCACACTACTCCACGATCCAGATGGAGGGATACAGAACGCTGAAAGCCGGCCAGCAGGTTCAGTTTGATGTCCATG
AAGGGCCAAAAGGCAATCACGCCAGCCTGATTGTGCCAGTGGAGACATCGGTGCCGGTGTAA

Protein sequence :
METGTVKWFNNAKGFGFICPIGGGDDIFAHYSTIQMEGYRTLKAGQQVQFDVHEGPKGNHASLIVPVETSVPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-14 51