Gene Information

Name : Pat9b_2364 (Pat9b_2364)
Accession : YP_004116222.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 2575309 - 2576061 bp
Length : 753 bp
Strand : -
Note : KEGG: spe:Spro_2934 putative amino-acid ABC transporter ATP-binding protein YecC; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGAGTGCCATTGAAGTACGTCAGCTGGTGAAGCAATTTCACGGCCAGACGGTGTTGCACGGCATCGACCTGGACGTGGC
TTCCGGCGAAGTGGTAGCCATTATCGGGCCGAGCGGCTCCGGTAAAACCACCTTATTGCGCAGTATCAACCTGCTGGAAG
TGCCAGATAGCGGCACCATCCGCGTGGGGGACATTACGGTCGATGCTGCGTTGGGTATCAATAAGCAGAAAGACCTTGTG
CGCCGGTTACGTCAGCAGGTCGGCTTTGTGTTCCAGAACTTCAATCTGTTCCCTCATCGATCGGTGCTGGAAAACATTAT
TGAAGGACCGGTGATCGTCAAGGGTGAACCGAAAGCAGAAGCCATTGCGCGAGCGCGTTCACTGCTGGAGAAAGTGGGGC
TGCACGGGAAGGAAGAGAGTTTTCCACGCCGTTTGTCCGGCGGGCAGCAGCAACGTGTCGCCATTGCGCGTGCGCTGGCG
ATGCGGCCGCAGGTGATCCTGTTTGATGAACCCACTTCAGCGCTGGACCCGGAACTGGTGGGCGAGGTATTGAACACCAT
CCGAGCTTTAGCGGAAGAGAAGCGCACCATGGTGATCGTTACCCACGAGATGAGCTTTGCCCGTGACGTCGCCGATCGTG
CCATCTTTATGGATCAGGGGCGTATTGTGGAGCAAGGCGTTGCGAAAGCGCTGTTCAGCAATCCGCAGCATGCCCGAACC
CGACAATTTCTCGATAAATTCCTTAATCAATAA

Protein sequence :
MSAIEVRQLVKQFHGQTVLHGIDLDVASGEVVAIIGPSGSGKTTLLRSINLLEVPDSGTIRVGDITVDAALGINKQKDLV
RRLRQQVGFVFQNFNLFPHRSVLENIIEGPVIVKGEPKAEAIARARSLLEKVGLHGKEESFPRRLSGGQQQRVAIARALA
MRPQVILFDEPTSALDPELVGEVLNTIRALAEEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGVAKALFSNPQHART
RQFLDKFLNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_2364 YP_004116222.1 ABC transporter-like protein NC_012469.1.7686878. Protein 8e-29 45