Gene Information

Name : Pat9b_2489 (Pat9b_2489)
Accession : YP_004116346.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2711420 - 2712379 bp
Length : 960 bp
Strand : -
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_13820 transcriptional regulator Cbl

DNA sequence :
GTGAATTTCCAGCAACTTAAAATTATACGTGAAGCAGCCCGTTGCGAGTTCAACCTGACCGAAGTGGCGAATACGCTCTT
TACCTCGCAATCCGGGGTGAGCCGTCATATACGCGATCTGGAAGATGAACTGGGCGTTGAAATTTTCATCCGCCGCGGCA
AACGTCTGCTGGGAATGACCGAACCCGGTAAAGCGCTGCTAACCATTGCTGAACGTATCCTTGATGAAGCGGGCAAAGTG
CGTCGCCTCGCGGATGTGTTTACCAATGAAACCAGCGGGGTGCTGACCATCGCCACCACCCACACGCAGGCGCGTTACAG
CCTGCCACGGGTGATTAAAGCCTTCCGCCAGCTCTATCCCAATGTGCGACTGGAGCTGAACCAGGGATCGCCGCAGGAAA
TTGTTGCCATGCTGCTGGCGGGTGAAGCGGATATCGGTATCGCCAGTGAGCAATTGGTGAACAACGCCAGTCTGGCGGCC
TTCCCGTGGTTCAGTTGGCATCACTCACTGCTGGTGCCGCACGATCATGAACTGTTGCAGAGTGAACCGGTTTCCCTCGG
TCAGCTGGGGCGTTACCCACTGATCACCTATCGGCAGGGCATCACCGGACGTTCGCGTGTCGATCGTGCTTTCCAGGCTG
CCGGATTAAAGCCGGATATCGTGCTCAGCGCCCAGGATTCTGATGTGGTAAAAACCTATGTCGAACTGGGACTGGGTGTC
GGTATCCTCGCTGACCAGGCTTGCGACATCTACGATGGCGAGGATCTGGTAAAAATCGATGCAGGTCATCTGTTCGATGC
CAATACGGTATGGCTTGGTTTGAAGCGCGGTCAGCTGCAACGCAATTATGTCTGGCAGTTCCTCGAATTGTGTAACGCGA
ACCTGTCGCTGGAAGAGATCAAACGCCAGGCACTCTCCTACGAAACCGGCGACGAACCGGCGATCGATTTCCAGATCTAA

Protein sequence :
MNFQQLKIIREAARCEFNLTEVANTLFTSQSGVSRHIRDLEDELGVEIFIRRGKRLLGMTEPGKALLTIAERILDEAGKV
RRLADVFTNETSGVLTIATTHTQARYSLPRVIKAFRQLYPNVRLELNQGSPQEIVAMLLAGEADIGIASEQLVNNASLAA
FPWFSWHHSLLVPHDHELLQSEPVSLGQLGRYPLITYRQGITGRSRVDRAFQAAGLKPDIVLSAQDSDVVKTYVELGLGV
GILADQACDIYDGEDLVKIDAGHLFDANTVWLGLKRGQLQRNYVWQFLELCNANLSLEEIKRQALSYETGDEPAIDFQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cbl YP_853089.1 transcriptional regulator Cbl Not tested PAI IV APEC-O1 Protein 1e-113 73