Gene Information

Name : Pat9b_2490 (Pat9b_2490)
Accession : YP_004116347.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2713251 - 2714168 bp
Length : 918 bp
Strand : -
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_13810 nitrogen assimilation transcriptional regulator

DNA sequence :
ATGAACTTAAGACGACTGAAATACTTTGTAAAAATCGTCGATATCGGCAGCCTGACTCAGGCAGCAGAAGTGTTGCATAT
TGCGCAGCCCGCGCTTAGCCAGCAGGTGGCAACGCTGGAGAACGAACTTGATCAGCAACTGCTGATCCGTACCAAGCGCG
GCGTAACGCCGACTGAAGCCGGTAAAATTCTTTATGCCCACGCACGCACCATCCTGCGTCAGTGTGAACAGGCACAGACG
GCAGTGATCAATGCCGGTCAGGCGCTGAATGGCCAGGTGTCGATTGGTCTGGCACCGGGTACCGCAGCCTCATCGCTGAC
CATGCCGCTGCTGCAAACCGTGCGCGAGCAGTACCCGGATGTGTTGGTCTATCTGCATGAAAATAGTGGCACCTCACTGA
ATGAAAAAGTGATGAACGGTCAGTTGGATATGGCGGTGCTGTATGACCGCGCCCCGACAGCAGGTATCAACAGCATTCCG
CTGATGAAAGAAGAACTCTATCTGGTCGGTGCCACTGACTGCCCGGGCGCGACGGTAGATCTGGCCGAGGTAGCACAGAT
GAACCTGTTCCTGCCACGTGACTACAGCGCCGTGCGTAAACGTGTGGATGAAGCCTTCTCCCTGCGTCGCCTGAGTGCAC
GCATTATCGGTGAGATTGAATCGATTTCGACGCTGACGGCGGCGGTATCGAGCGGTATGGGTGTAACCGTACTGCCGGAA
TCGGCTGCGCGTGCGCTGGTGAGTTCCACCCATGCGTGGATGGCGCGTATCAATAGCCCGTCACTGAACCTGCCATTGTC
GCTGAATGTTTCAGCACGCCTGCCGTTGTCTCCGTCGGCTCAGGCGGTGAAAAATATTCTGCTGTCGCTGCTCAATAAGC
CGATGGTGGAAGATCGCGAATTGATGCTGGTGAGCTGA

Protein sequence :
MNLRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLENELDQQLLIRTKRGVTPTEAGKILYAHARTILRQCEQAQT
AVINAGQALNGQVSIGLAPGTAASSLTMPLLQTVREQYPDVLVYLHENSGTSLNEKVMNGQLDMAVLYDRAPTAGINSIP
LMKEELYLVGATDCPGATVDLAEVAQMNLFLPRDYSAVRKRVDEAFSLRRLSARIIGEIESISTLTAAVSSGMGVTVLPE
SAARALVSSTHAWMARINSPSLNLPLSLNVSARLPLSPSAQAVKNILLSLLNKPMVEDRELMLVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nac YP_853090.1 nitrogen assimilation transcriptional regulator Not tested PAI IV APEC-O1 Protein 1e-106 72