Gene Information

Name : Pat9b_2671 (Pat9b_2671)
Accession : YP_004116527.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : 37kDa nucleoid-associated protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3081
EC number : -
Position : 2930142 - 2931146 bp
Length : 1005 bp
Strand : -
Note : PFAM: 37kDa nucleoid-associated protein; KEGG: eta:ETA_12590 nucleoid-associated protein NdpA

DNA sequence :
ATGAGTCTGGATATCGACCAGATCGCCCTGCATCAGTTAGTCAAACGTGATGAAAACCAGCTGGAGCTGGTGCTGCGCGA
CACTCTGCTGCCTGCCACCCAAGCGGTGGAGGCGATGGCAGAGGAGTTACATCGGGTTTATAGCGCCAAAAACAAAGCCT
ATGGGCTGTTTGATGCGGAAAGCGAGCTGGCTGCTGCATTGCGTAATTGCCGCAAAGGGGAAGATGATTTTCTGGCTTTC
AGTCGTGTGGCAACCGGCCGTCTGCGCGATGAGCTGAGCAAATACCCGTTTGCTGAAGGCGGTATTGTGCTGTTTATCCA
TTATCGTTACCTGGCGGTGGAGTATCTGCTGGTGGCCGTGCTTAACAGCCAGTCCAGTATGCGCGTTAACGAACAGCTGG
ATATCAGCAGCACCCACTATCTTGATATCAACCATGCGGATATCGTGGCGCGGATTGATCTCACCGAATGGGAAACTAAC
CCGGAATCCACCCGTTATCTGACGTTTTTGCGTGGGCGAGTCGGGCGCAAGGTCGCTGACTTCTTTATGGATTTCCTTGG
TGCCAGCGTCGGTCTGGATACCAAAGCGCAGAACCGTGGTTTGTTGCAGGCGGTAGATGATTATTGCGCGGAATCGAATC
TGGATAAAAATGAGCGCCAGAATTATCGTCAGCAGGTCTACAGCTACTGCAACGATCAGCTACAGGCGGGTGAGGAGATT
GCGCTGGAAGATCTCTCGAGTGAACTGCCGCCACTGGGCGAGAAAACCTTTCAGGCGTTTACCCAGGAGCAGGGCTATGA
ACTGGAAGAGCACTTTCCTGCCGACCGCAGCACGCTGCGTCAGTTGACCAAATTTGCCGGTAGCGGGGGTGGCTTAACCC
TGAATTTCGATGCCATGCTGTTGGGCGAGCGTATTTTTTGGGACCCGGCGACCGACACCTTGACCATCAAAGGGACGCCG
CCGAATCTGCGCGATCAGTTGCAACGTCGCACCGGTGGAAACTGA

Protein sequence :
MSLDIDQIALHQLVKRDENQLELVLRDTLLPATQAVEAMAEELHRVYSAKNKAYGLFDAESELAAALRNCRKGEDDFLAF
SRVATGRLRDELSKYPFAEGGIVLFIHYRYLAVEYLLVAVLNSQSSMRVNEQLDISSTHYLDINHADIVARIDLTEWETN
PESTRYLTFLRGRVGRKVADFFMDFLGASVGLDTKAQNRGLLQAVDDYCAESNLDKNERQNYRQQVYSYCNDQLQAGEEI
ALEDLSSELPPLGEKTFQAFTQEQGYELEEHFPADRSTLRQLTKFAGSGGGLTLNFDAMLLGERIFWDPATDTLTIKGTP
PNLRDQLQRRTGGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01050 YP_001437154.1 nucleoid-associated protein NdpA Not tested Not named Protein 5e-129 85