|
Name : Pat9b_2794 (Pat9b_2794) Accession : YP_004116650.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 3066276 - 3068234 bp Length : 1959 bp Strand : - Note : KEGG: eta:ETA_11420 putative cytochrome c-type biogenesis protein; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein DNA sequence : ATGATGCCAGAAATTGGCAGCTTTCTGCTCTGCCTGGCGCTGGGACTGGCGCTACTGTTAAGTATTTATCCGCTGTGGGG CGCGGTGCGTCAGGACGCGCGTTTGATGGCATTGTCTCGCCCGCTCACGGTCGGCATGTTTGCCTGTATCGCGGCGGCGT TTCTGCTGTTGGTGCACGCGTTTATCGTTAACGATTTTACCGTGGCTTATGTCGCTACCAACTCCAACACCTTGCTGCCG GTTTACTATCGCATCGCTGCAACCTGGGGCGCGCACGAAGGTTCGCTGCTGCTGTGGGTGTTGCTGCTAAGCAGTTGGAC ACTGGCGGTGGCGATTTTTAGTCGCGGTATGCCGCAGGATGCGCTGGCGCGCGTGCTGTCGGTGATGGGGATGATCAACC TCGGTTTCCTGCTGTTTATCACCCTGACATCCAATCCGTTTACCCGCACGTTACCCAACTTCCCGATTGACGGCAGTGAC CTCAACCCGATGTTGCAAGATATCGGTCTGATCTTCCACCCGCCGCTGCTGTATATGGGCTATGTCGGTTTCTCGGTGGC GTTTGCCTTTGCTATCGCTTCGTTGATGGCAGGCCGTCTCGATACCGCCTGGGCGCGCTGGTCACGTCCGTGGACCACCG CCGCATGGGTGTTCCTGACCATTGGCATCGTACTGGGTTCAGCTTGGGCCTACTACGAACTCGGCTGGGGCGGCTGGTGG TTCTGGGACCCGGTTGAAAATGCCTCCTTTATGCCGTGGCTGGCGGGTACGGCGTTGATGCACTCGCTGGCCGTCACGGA AAAACGCGGTAGCTTCAAATCCTGGACGGTGCTGCTGGCGATTACCGCCTTCTCGCTGAGTTTGCTTGGGACTTTCCTCG TGCGTTCTGGCGTGTTGGTGTCGGTCCATTCGTTTGCCTCCGATCCGGCGCGTGGCATGTTTATCCTCGCCTTCCTGGTG ATTGTGATTGGCAGCTCGCTGCTGCTGTACGCGATTAAAGGCGGCCAGGTGCGTAGCCGGGTACAAAATGAAGCCTGGTC GCGCGAATCGTTCCTGCTGGGTAACAACGTGCTGCTGATCGCCGCGATGTTAGTGGTACTGCTGGGCACTTTGCTGCCAC TGGTGCACAAGCAACTGGGGCTGGGCAGTATTTCGGTCGGTGAGCCGTTCTTTAATACGATGTTCACCTGGTTGATGGCA CCGTTTGCGCTGATGCTCGGCATTGGTCCGCTGGTGCGCTGGCGGCGTGATGAGCCGCAGAAACTGTGGAAACGCCTCGG CATTGCCCTGGTGGTGACGCTCATCCTTTCCATTGCGCTGCCGTGGTTGTTGCAGGATCGCATTGAAGCGATGACGGTGA TTGGCCTGCTGATGTCGATCTGGGTGATCCTGTTGACGTTAATGGAGCTGCACGAACGCGCCACGCATCGCCACACCTTC TTCAAAGGACTGCGCCATCTGACGCGCAGCCACTGGGGCATGGTGCTCGGTCATCTCGGCGTGGCGGTGACGGTGATTGG TATCGCCTTCAGTACCCAGTACAGCGTTGAGCGTGATGTGCGTATGAAGTCGGGCGATAATATTGATATCCACAACTATC ACTTCATCTTCCGTGACGTGCACAACCTGCAAGGGCCGAACTACAGCGGTGGCGTGGCGATTATCGATGTGACCCGCAAT GGCAAGCCAGAAGCGGTACTGCACGCGGAGAAACGCTTCTATACCGCGGCACGGACCATGATGACTGAAGCGGCGATCAG CGGTGGCTTTACCCGTGATCTCTATGCGGCGCTGGGTGAAGAGTTAGATGATGGCTCCTGGGCGGTGCGTATTTACTACA AACCTTTCGTGCGCTGGATTTGGTTTGGCGGCGTGTTTATGGCGGTGGGTGGCCTGCTGTGTCTGCTCGATCCGCGTTAT CGTTCGCGCAAAAAAGCGCAACGGGAGGAACAGGCATGA Protein sequence : MMPEIGSFLLCLALGLALLLSIYPLWGAVRQDARLMALSRPLTVGMFACIAAAFLLLVHAFIVNDFTVAYVATNSNTLLP VYYRIAATWGAHEGSLLLWVLLLSSWTLAVAIFSRGMPQDALARVLSVMGMINLGFLLFITLTSNPFTRTLPNFPIDGSD LNPMLQDIGLIFHPPLLYMGYVGFSVAFAFAIASLMAGRLDTAWARWSRPWTTAAWVFLTIGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLAGTALMHSLAVTEKRGSFKSWTVLLAITAFSLSLLGTFLVRSGVLVSVHSFASDPARGMFILAFLV IVIGSSLLLYAIKGGQVRSRVQNEAWSRESFLLGNNVLLIAAMLVVLLGTLLPLVHKQLGLGSISVGEPFFNTMFTWLMA PFALMLGIGPLVRWRRDEPQKLWKRLGIALVVTLILSIALPWLLQDRIEAMTVIGLLMSIWVILLTLMELHERATHRHTF FKGLRHLTRSHWGMVLGHLGVAVTVIGIAFSTQYSVERDVRMKSGDNIDIHNYHFIFRDVHNLQGPNYSGGVAIIDVTRN GKPEAVLHAEKRFYTAARTMMTEAAISGGFTRDLYAALGEELDDGSWAVRIYYKPFVRWIWFGGVFMAVGGLLCLLDPRY RSRKKAQREEQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 0.0 | 73 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-130 | 51 |
