Gene Information

Name : Pat9b_2937 (Pat9b_2937)
Accession : YP_004116792.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : cysteine desulfurase IscS
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1104
EC number : 2.8.1.7
Position : 3224519 - 3225691 bp
Length : 1173 bp
Strand : -
Note : TIGRFAM: cysteine desulfurase IscS; KEGG: cko:CKO_00251 cysteine desulfurase; PFAM: aminotransferase class V

DNA sequence :
ATGAAATTACCGATCTACCTGGATTACGCAGCCACTACGCCTGCGGATCCGCGTGTTGCCACCAGAATGATGCAGTTTCT
CACCCTGGATGGCACGTTCGGTAACCCCGCTTCCCGTTCTCACCGTTTTGGCTGGCAGGCTGAAGAAGCTGTTGATGTGG
CACGCAATCAGGTTGCGGAGCTGGTCAATGCCGATCCGCGTGAAATCGTGTTTACGTCCGGTGCCACCGAGGCCGATAAC
CTCGCCATCAAAGGCGCGGCGCAGTGCCATCAGGCGCGCGGCAAACACATCATTACCAGCCAGACCGAACACAAAGCGGT
GCTCGATAGCTGCCAGCAGCTGGAGCGCGAAGGCTTCGAGGTCACCTATCTGCAACCCGGTCCTGACGGTATCGTTACCC
GCGAGATGTTGGCGGCGGCAGTGCGTGAAGACACGGTGCTGGTTTCGCAGATGCACGTCAACAACGAAACGGGCGTGATT
CAGGATATCGCCGCACTCGGTGCCTTGTGCCGTGAACGTGACATTCTGTTCCATGTCGATGCGACGCAGAGTGTCGGTAA
GCTGCCGATTGACGTCAGTGTGCTGCCGGTGGATTTGATGTCGTTCTCGGCACACAAAATTTATGGCCCGAAAGGCATTG
GTGCGCTCTGGGTACGATGCAAACCGCGTTTGCAGATTGATGCGCAGATGCACGGTGGCGGTCATGAGCGCGGCATGCGC
TCCGGCACTTTGCCGGTGCATCAGATCGTCGGCATGGGCGAAGCCTACCGCATTGCCCGTGAAGAGATGAGCAGTGAAGT
TGCCCGTCTCGCTGCCCTGCGCCAGCGTCTGTGGCAGGGCATCAGCGCCTTGAGCGATGTCACGCTGAATGGTTCGCTGG
AGCAGGGTGCGCCCAATATCCTCAATATCAGTTTTGCCCACGTTGAAGGTGAATCGTTGATTATGGCGCTGAAAGATCTG
GCGCTCTCTTCCGGTTCCGCCTGTACTTCAGCCAGTCTCGAACCCTCTTACGTGCTACGCGCGATGGGCGTTGAGCAGGA
GCTGGCACACAGCTCGCTGCGTTTTTCGCTCGGACGTTTTACCACCGCAGAGGAAATTGATTACGCCATCGAGCTGGTCA
ACAAAGCGGTAACCCGTCTGCGGGCGCTGATGCCTGCGGCAAATTCTCGCTAA

Protein sequence :
MKLPIYLDYAATTPADPRVATRMMQFLTLDGTFGNPASRSHRFGWQAEEAVDVARNQVAELVNADPREIVFTSGATEADN
LAIKGAAQCHQARGKHIITSQTEHKAVLDSCQQLEREGFEVTYLQPGPDGIVTREMLAAAVREDTVLVSQMHVNNETGVI
QDIAALGALCRERDILFHVDATQSVGKLPIDVSVLPVDLMSFSAHKIYGPKGIGALWVRCKPRLQIDAQMHGGGHERGMR
SGTLPVHQIVGMGEAYRIAREEMSSEVARLAALRQRLWQGISALSDVTLNGSLEQGAPNILNISFAHVEGESLIMALKDL
ALSSGSACTSASLEPSYVLRAMGVEQELAHSSLRFSLGRFTTAEEIDYAIELVNKAVTRLRALMPAANSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 3e-127 69