Gene Information

Name : Pat9b_0407 (Pat9b_0407)
Accession : YP_004114289.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : major facilitator superfamily protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 483427 - 484938 bp
Length : 1512 bp
Strand : -
Note : PFAM: major facilitator superfamily MFS_1; KEGG: cko:CKO_04628 putative sialic acid transporter

DNA sequence :
ATGCCTGAAGAAACGATGCTACTACCCTGGTATAAACGGCTGAATCGCCAGCAATGGAAAGCCTTCTGGGCCGCATGGAT
GGGTTATATGCTGGACGGCTTTGACTTCGTCATTATTACGTTAGTGCTGACGGAAATAATGGCGGAATTTAATGTCACCA
CGGCGGAAGCGGCCGCATTAATTTCTGCGGCGTTTATTTTACGCTGGTTTGGTGGATTAGCGCTCGGTGCCATGGGCGAT
AAATATGGTCGTAAAAGTGCGATGATCACCAGCATTATATTATTTGCCGGTGGCACATTCGCCTGCGGTATCGCACCCAA
TTATACCTGGATGTTTATTGCCCGCGTGCTGGTGGGGATTGGCATGGCTGGCGAATACGGCACCAGTTCCGCCTATGCCA
TCGAAACCTGGCCGAAAGATATGCGCAATAAAGCCAGCGCCTTCCTCAATTCCGGTTTTTCTGCGGGGGCGATTTTGTCA
GTGATGGCGTATAGCTGGGTGGTTCCGCTGTGGGGTTGGCGCTCGCTGTTTTACCTCGGCATTATCCCGGTGTTTTATGC
CCTGTGGCTGCGTCGCGCCATTCCTGAAGCCGAAGAGTGGGCAGCGGCCAAAGCCAAAGCGGCCAAACCGGCGGAAACCA
TGATCGATACGCTGTTTCGTGGGCCGAACCGGGTGCGCAATACCCTGAACCTGTTACTCGGTCTGCTGGCCGCCGTCGCA
CTCTACTTCTGCTTTGATCACCAAACCTCGGGCATGGTGACCGGCGTGCTGGCCGTGATCATTGCAGCGATTTTCATCCG
GTTTCTGGTCCAGAGCGGCGGTGAACGCTGGCCCACCAGCCTGATGCTGACCGTCACCATCGTCTGTGTATTTCTTTATG
GCTGGCCGATCCACGCGCTGCTGCCCACTTATCTGAAAACCGAGCTGCATTACTCGCCGGAAGTGGTCGCGCTGGTGTTC
TCCTTTAGCCGCTTCGGCATGGGCCTCGGCTGCTGTGTGGCGGGGATCGCCGCCGATCGCATCGGCACCCGCAAAACTTA
TGTGCTGAGCCTGCTGATCGCCCAGATGATCATCATCCCGGTATTTATGCTCAACGGCTCCAGCGTCTGGCTGCTGTGCC
TGCTGATCTTCCTGCAACAGCTGTTCAGCCAGGGTGTCGGCGGCCTACTGGCGAAGATGATCAGCGGCTATTTCGATACC
GAACAGCGCGCGGCCAACCTCAGTTTTATCTACAACATCGGCTCGCTCGGCGGCGCACTCGCGCCGGTGCTGGGAGCGCT
GATCGCCCAGCACGCCTCGCTGGGCAGCGCGCTCGGCGGCCTGTCGTTTGGCCTGACCTTCGTGGTGATGTTGTTGATTG
GCTTTGATATGCCGTCACGCGTGCAGCGCTGGCTGAAACCGCAGGCGCTGCGCCACTACGACACCGTTGATGGCACCCCA
CTTGCTGGCGCGTTCACTCGTGAAGAACGTGCCACCCAGGATCTTACCCCGCTTAACTCAGGCAAACCCTGA

Protein sequence :
MPEETMLLPWYKRLNRQQWKAFWAAWMGYMLDGFDFVIITLVLTEIMAEFNVTTAEAAALISAAFILRWFGGLALGAMGD
KYGRKSAMITSIILFAGGTFACGIAPNYTWMFIARVLVGIGMAGEYGTSSAYAIETWPKDMRNKASAFLNSGFSAGAILS
VMAYSWVVPLWGWRSLFYLGIIPVFYALWLRRAIPEAEEWAAAKAKAAKPAETMIDTLFRGPNRVRNTLNLLLGLLAAVA
LYFCFDHQTSGMVTGVLAVIIAAIFIRFLVQSGGERWPTSLMLTVTIVCVFLYGWPIHALLPTYLKTELHYSPEVVALVF
SFSRFGMGLGCCVAGIAADRIGTRKTYVLSLLIAQMIIIPVFMLNGSSVWLLCLLIFLQQLFSQGVGGLLAKMISGYFDT
EQRAANLSFIYNIGSLGGALAPVLGALIAQHASLGSALGGLSFGLTFVVMLLIGFDMPSRVQRWLKPQALRHYDTVDGTP
LAGAFTREERATQDLTPLNSGKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECUMN_3383 YP_002414054.1 putative sialic acid transporter Not tested Not named Protein 5e-103 56