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Name : Pat9b_0785 (Pat9b_0785) Accession : YP_004114665.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Unknown Product : lytic transglycosylase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0741 EC number : - Position : 917567 - 918949 bp Length : 1383 bp Strand : - Note : manually curated; PFAM: Lytic transglycosylase catalytic; MLTD_N domain protein; Peptidoglycan-binding lysin domain; KEGG: eta:ETA_26380 membrane-bound lytic murein transglycosylase D; SMART: Peptidoglycan-binding LysM DNA sequence : ATGAAGGCAAAAGCGATATTAATCGCCTCTGTCTTGCTGGTGGGAGGTTGTCAGGCATCAAGGAATGACGCCACTATCCC GCAACAGCATGCTCAGAGCCTGTCTTCAGCTGGTCAAGGTGAAAATGGAAAGTACGGAGATCGCTTGTTGTCGCCGCGCT GGCAAGATGATGGAACAAGCCTCGCAGAAGACACTGATCTCTGGAATCACATTAGTGACGAGTTGAAGATGGGGATTCCG GATAACTCCCGGATCCGCGAACAAAAAACAAAGTACTTAAAAAATAAGAGCTATCTCCACGATGTAACATTACGGGCAGA GCCGTACATGTACTGGATAGTCGAGCAGATACAGAAACGTAAGATGCCGATGGAACTAGTACTGCTACCCATAGTGGAGA GCGCTTTTGACCCACATGCAACATCTTCTGCGAATGCCGCAGGCATCTGGCAGATTGTTGCAACAACGGGCAAAAACTAT GGTTTGAAACAAAACCAGTGGTATGACGGTCGCCGGGATGTGGTGGCGTCTACCAAGGTTGCGCTGGATATGATGCAGCG TCTCAACACCATGTTTGACGGTGACTGGTTACTGACCGTTGCCGCTTATAACAGTGGTGAAGGACGTGTGTTGAAAGCGA TTAAACAGAATAAGGCGCGCGGTAAGCCGACCGATTTCTGGAGTTTATCGCTGCCACGCGAAACCGCGGTTTATGTTCCG AAAATGTTGGCCTTGAGCGATATTCTCAAGAACAACAAGCGCTACGGCATCAAATTGCCGACCCCGAACGAGAGCCGTGC ACTGGCTCGTGTTGAAGTGGGTCAGCAGATTGAGCTGACGCAGGCCGCAGATATGGCTGGCATGTCGTTAAGTAAGCTGA AAAGCTTCAATGCTGGTTATAAACACGGCAGCACAGCGCCGAATGGACCGCACTACATTATGGTGCCTAAGTCCAACGTT GCTCAGCTCCGCAATTCACTGGCCTCCGGTGATATTGCCGCCGTGCAGCCTTCTCAACTGGCAAAAGCCGGTGATGCGGG AAGCAGCTACACGGTTCGCAAAGGCGACACCTTGTCTGGCATTGCCAGCAAGCTCGGCGTGAGCATTAATACACTGAAGC AGCAGAATAACCTGCGCGGTGCCTCGGTTCGAATCGGTCAGAAACTGACCATCGGCGATAAAGGCTCGCAGCTGGCCGAT AACGGCAACAGCATCACCTATCGTGTTCGTAAGGGTGATTCTCTTGCCAGTATCGCGCGACGTCATGGAGTTAACATTCA GGACGTTATGCGCTGGAACAGTGTATTAAGTGATGCGAAAAACATTCAGCCGGGTGATAACCTCACGCTGTTTGTTCATA ATAGCGCAACGCCAGACACCTAA Protein sequence : MKAKAILIASVLLVGGCQASRNDATIPQQHAQSLSSAGQGENGKYGDRLLSPRWQDDGTSLAEDTDLWNHISDELKMGIP DNSRIREQKTKYLKNKSYLHDVTLRAEPYMYWIVEQIQKRKMPMELVLLPIVESAFDPHATSSANAAGIWQIVATTGKNY GLKQNQWYDGRRDVVASTKVALDMMQRLNTMFDGDWLLTVAAYNSGEGRVLKAIKQNKARGKPTDFWSLSLPRETAVYVP KMLALSDILKNNKRYGIKLPTPNESRALARVEVGQQIELTQAADMAGMSLSKLKSFNAGYKHGSTAPNGPHYIMVPKSNV AQLRNSLASGDIAAVQPSQLAKAGDAGSSYTVRKGDTLSGIASKLGVSINTLKQQNNLRGASVRIGQKLTIGDKGSQLAD NGNSITYRVRKGDSLASIARRHGVNIQDVMRWNSVLSDAKNIQPGDNLTLFVHNSATPDT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mltD | AAO17227.1 | MltD | Not tested | tcd island | Protein | 7e-128 | 58 |
