Gene Information

Name : Pat9b_0954 (Pat9b_0954)
Accession : YP_004114834.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : AsnC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1522
EC number : -
Position : 1091016 - 1091477 bp
Length : 462 bp
Strand : +
Note : KEGG: eta:ETA_24980 AsnC-family regulatory protein; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type

DNA sequence :
ATGCTAGATAAAACTGACCGTACACTGCTGGCGTTATTACAGCAGGATTGCACCCTGTCACTCCAGACGCTGGCAGATGC
GGTCAATCTCACCACCACACCGTGCTGGAAACGCCTGAAAAAACTGGAAGATGATGGCATTATTCGTGCGCGCGTGGCGC
TATTGGACGGCGATAAAATCGGACTGGCGCTGACTGCGTTCATGTTTGTCAAAACCCAGCAGCACAGCAGCGACTGGTAT
CAGCAATTTGTCAGCGTGGTCCAGCAGATGCCAGAAGTGATGGCGTTCTATCGTATGGCCGGAGAATACGACTATCTGCT
GCGCATTCAGGTGGCAGATATGAAAAGTTACGACGGTTTTTATAAGCGGCTGGTGAATGGCGTACCGGGTCTGATTGATG
TGACCTCCAGTTTCGCGATGGAAGAAATTAAATATACCACCGCATTGCCGGTAGCACCCTGA

Protein sequence :
MLDKTDRTLLALLQQDCTLSLQTLADAVNLTTTPCWKRLKKLEDDGIIRARVALLDGDKIGLALTAFMFVKTQQHSSDWY
QQFVSVVQQMPEVMAFYRMAGEYDYLLRIQVADMKSYDGFYKRLVNGVPGLIDVTSSFAMEEIKYTTALPVAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tinR NP_454916.1 transcriptional regulator Not tested SPI-6 Protein 3e-25 42