Gene Information

Name : Pat9b_5134 (Pat9b_5134)
Accession : YP_004117849.1
Strain :
Genome accession: NC_014838
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 3610 - 3822 bp
Length : 213 bp
Strand : -
Note : KEGG: yen:YE0940 cold shock-like protein CspG; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGTCTAATAAAATCCGTGGAACGGTTAAGTGGTTCAATTCAGAGAAAGGTTTCGGTTTTATCTCTCCTGAAAATGGTAG
CAAGGACGTATTCGTTCATTACTCCGCTATCCAGGGTACAGATTACCGTTCACTTGACGAAGGTCAACGTGTTGAATTTT
CAGTTGAAGATGGTCAGAAAGGCCCTTCAGCAGTCAATGTGGTAGGTCTTTAA

Protein sequence :
MSNKIRGTVKWFNSEKGFGFISPENGSKDVFVHYSAIQGTDYRSLDEGQRVEFSVEDGQKGPSAVNVVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 4e-21 69
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 8e-08 44