Gene Information

Name : Pat9b_5728 (Pat9b_5728)
Accession : YP_004118440.1
Strain :
Genome accession: NC_014838
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4771
EC number : -
Position : 596545 - 598737 bp
Length : 2193 bp
Strand : +
Note : KEGG: kpu:KP1_2278 TonB dependent outer membrane siderophore receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor

DNA sequence : 
GTGAATGTAACTGCATGTAGCCAAAAGCGTCCCGTCGCGCTGTTTTTGGCCGGGCTGCTGAGTACGTCAGCTTATGCCGC
CAATGAGGAGCCAACCGAAAAACTGGCTGACGATGAATCGATGATCGTCACGGCGGAAGAGGAACTGAAACAACAGCCGG
GTGTGTCAACCATCACGGCGGAAGACATTCAGAAAAGTCCTCCGGTTAACGATTTGTCCGATATTATTCGTAAGATGCCT
GGCGTGAATCTCACCGGCAACAGCGCCAGCGGCAGCCGTGGTAATAACCGCCAGATCGATATTCGCGGCATGGGGCCAGA
AAACACCTTAATTATGATTGATGGTGTTCCTGTTACCTCGCGTAATGCCGTGCGTTACAGCTGGCGCGGTGAACGCGATA
CGCGCGGTGATACCAACTGGGTGCCCGCCGAAATGGTGGAGCGCATCGAAGTCATTCGCGGCCCTGCGGCATCGCGTTAT
GGCTCAGGTGCTGCTGGTGGCGTGGTGAATATTATTACCAAACGCCCAACCAACGACTGGCACGGCTCATTATCGCTGTT
CACCAACCAGCCAGAAGATGATAAAGAAGGCGCGACCAAGCGCGCCAACTTCAGCCTGAGTGGACCGCTAGCGGGCGATG
CCCTCACCATGCGCCTGTTTGGTAACATCAATAAAACTGACGCGGATGCGTATAACATCAATACCGCAGAGAACGGTTCT
TATGCCGCAGGCCGCGAGGGTGTGCGTAATAAAGACATCAACACGGTGCTCTCGTGGAAAATCACCCCGCTGCAAATTGT
CGATTTCAGCTATGGCTATAGTCGCCAGGGCAATATTTATGCGGGCGATACGCAATACAGCAACGGTAATATCAGCCCGG
ATGGTCTGGTTGAGTCACTGTATGGTGATGAAACGAACCGTATGTATCGCCAGAGTTATGGTCTGACCTATAACGGCATC
TGGGACTGGGGTACATCAAAGCTCAATTTTAATTACGAGAAGACCAACAACACCCGCCTGCAAGAAGGTTCGACCGGCCG
TGTTGAAGGGATGATCAACAGCAATGACTACGCAACCAGCCGCCTGGAAAGTTACCGTGCGGGGGGAGAGATTAACTTCC
CGGTTGAATTGCTGGTTGATCAAACCGTGACCCTGGGGGCGGAATGGAATCGTGATGAATTGAATGATCCGGCCTCTATG
ACGGCGACCGATGCCTCCGGCGTAATCATTGATGGCGTTTCCGGTAATCCTTCCTCACGCAGCAGCAAAAATAGCGCCAC
CATCAGCTCTCTTTATTTTGAAGATAACATCGCCGCCACCGACAGTACTGAAGTGATTCCTGGCCTGCGCTTCGATTATC
ACGATAAATTCGGTGCTAACTGGAGCCCAAGCCTGAATATTTCTCAGGGGCTGGGTGATTATTTCACCCTGAAAGCGGGT
ATCGCTCGTGCCTTCAAGGCACCGAACCTGTATCAATCCACGGAGGGTTATTTGCTCTCTACCCGCGGCAACGGCTGCCC
GGTGGGTATTTCTACCGGTAGCTGTTATCTATTAGGTAATGAAAATCTCGACCCTGAAATCAGCGTTAATAAAGAAGTTG
GGATCGAATTCCATAACGAGGGTTATACCGCCGGTATTACCTGGTTCCGCAATGATTATAAGAACAAAATCGTCGCGGGT
GACGAGGCTGTGGGTTACACCTCAAACGGATACAACGTGTTGCGTTGGGAGAATGGCGGCAAAGCGATTGTGGAAGGTCT
GGAAGGCAATATGACGATTCCGGTGATTCGCGATACGCTGGAGTGGCGCACTAACGCGACTTATATGTTCCGTTCGGAAA
GTAAGAAGACCGGTAACCCATTGTCAGTGATCCCGGAATTCACCATTAACTCACAGCTAGACTGGCAGGTCACGGATAAG
CTGGATGCCAATATTAACTGGACACAGTATGGCCGCCAGAAACCTCGTCAGTACGCTGAGATCCGTAACGAGTCGGGTGC
CATTTCTAACCGCGAAATCAGTCCCTACTCTATCTTTGGCCTGAACGTGAATTACGAGATCACCAAAAACTTGCGTGCTA
ACGCGGGCATCAACAACCTGTTTGATAAACGGGTGTATCGTGAAAATGATGGCGCATCAACCTATAACGAGCCGGGACGT
GCTTATTATGCGGGCGTGACGATGTCGTTCTGA

Protein sequence : 
MNVTACSQKRPVALFLAGLLSTSAYAANEEPTEKLADDESMIVTAEEELKQQPGVSTITAEDIQKSPPVNDLSDIIRKMP
GVNLTGNSASGSRGNNRQIDIRGMGPENTLIMIDGVPVTSRNAVRYSWRGERDTRGDTNWVPAEMVERIEVIRGPAASRY
GSGAAGGVVNIITKRPTNDWHGSLSLFTNQPEDDKEGATKRANFSLSGPLAGDALTMRLFGNINKTDADAYNINTAENGS
YAAGREGVRNKDINTVLSWKITPLQIVDFSYGYSRQGNIYAGDTQYSNGNISPDGLVESLYGDETNRMYRQSYGLTYNGI
WDWGTSKLNFNYEKTNNTRLQEGSTGRVEGMINSNDYATSRLESYRAGGEINFPVELLVDQTVTLGAEWNRDELNDPASM
TATDASGVIIDGVSGNPSSRSSKNSATISSLYFEDNIAATDSTEVIPGLRFDYHDKFGANWSPSLNISQGLGDYFTLKAG
IARAFKAPNLYQSTEGYLLSTRGNGCPVGISTGSCYLLGNENLDPEISVNKEVGIEFHNEGYTAGITWFRNDYKNKIVAG
DEAVGYTSNGYNVLRWENGGKAIVEGLEGNMTIPVIRDTLEWRTNATYMFRSESKKTGNPLSVIPEFTINSQLDWQVTDK
LDANINWTQYGRQKPRQYAEIRNESGAISNREISPYSIFGLNVNYEITKNLRANAGINNLFDKRVYRENDGASTYNEPGR
AYYAGVTMSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 0.0 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_5728 YP_004118440.1 TonB-dependent siderophore receptor VFG1650 Protein 0.0 65
Pat9b_5728 YP_004118440.1 TonB-dependent siderophore receptor VFG0935 Protein 0.0 64
Pat9b_5728 YP_004118440.1 TonB-dependent siderophore receptor VFG0923 Protein 7e-162 52