Gene Information

Name : Pat9b_4946 (Pat9b_4946)
Accession : YP_004118802.1
Strain :
Genome accession: NC_014839
Putative virulence/resistance : Virulence
Product : periplasmic binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4594
EC number : -
Position : 216319 - 217185 bp
Length : 867 bp
Strand : -
Note : PFAM: periplasmic binding protein; KEGG: cko:CKO_03834 iron-dicitrate transporter substrate-binding subunit

DNA sequence : 
ATGCGCGTTTTTTTGTTGTTGCTGGCGTTGATGGGACCGGCCAGTGCGGTGACGGTGCAGGATCAGCACGGCACCTTTAT
CCTAGATCAGGTGCCACAACGGATTGTGGTGCTGGAATTGTCATTTGCGGATGCGCTGGCGGCGGTGGATATCAGCCCGG
TGGGGATTGCGGACGATAACGATCCACAACGCTTGCTGCCGGAAGTGCGTGAGCACCTCCGGCCCTGGCAATCCGTCGGG
CTGCGTGGGCAGCCCAGTCTGGAAGCCATCAGCGCCTTGCATCCGGATCTGATCATCGCCGACAGCAGTCGTCACAGCGG
TGTCTACAGTGCATTGCAGCGTATCGCCCCGGTGTTGTTGTTGCCGTCACGCAATGAAACCTATGCAGAAAATCTCCAGT
CGGCGGCCATCATCGGTGAAGTGGTAGGGAAAAAGGCTGAGATGGATCAGCGCCTGGCGTTGCATCGACAACGCATCGCG
GCAGCGGCCAAACAGCTGCCGCAGGGTGCGCGGGTGCTGTTTGGCACTTCGCGAGAAAATCAGTTCACGCTGCATTCGCG
CGACAGCTACACCGGCGGAGTGTTGACCGCGCTGGGGCTACAGGTGCCAGAACCGATTCAGGGGGCGGCGATGACACCGA
TCGGCCTCGAAAGCCTGCTGGCGCAGAACCCGGACTGGTTGCTGGTCGCGCACTATCGCCAGGAAAGCATCGTCAAGCGC
TGGGAAACCGATCCGCTGTGGGGGATGTTGCATGCGGCGCAGCAACACCATGTCCGCGCTGTCGACAGCAACAGCTGGGC
GCGCATGCGTGGCTTGTTTGCGGCAGAAAAAATTTCACGTGACGCCGTCATGTTATTTACACCATGA

Protein sequence : 
MRVFLLLLALMGPASAVTVQDQHGTFILDQVPQRIVVLELSFADALAAVDISPVGIADDNDPQRLLPEVREHLRPWQSVG
LRGQPSLEAISALHPDLIIADSSRHSGVYSALQRIAPVLLLPSRNETYAENLQSAAIIGEVVGKKAEMDQRLALHRQRIA
AAAKQLPQGARVLFGTSRENQFTLHSRDSYTGGVLTALGLQVPEPIQGAAMTPIGLESLLAQNPDWLLVAHYRQESIVKR
WETDPLWGMLHAAQQHHVRAVDSNSWARMRGLFAAEKISRDAVMLFTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecB AAL08454.1 FecB Virulence SRL Protein 4e-97 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_4946 YP_004118802.1 periplasmic binding protein VFG1045 Protein 2e-97 70