Gene Information

Name : Pat9b_4948 (Pat9b_4948)
Accession : YP_004118804.1
Strain :
Genome accession: NC_014839
Putative virulence/resistance : Virulence
Product : anti-FecI sigma factor, FecR
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG3712
EC number : -
Position : 219624 - 220577 bp
Length : 954 bp
Strand : -
Note : PFAM: FecR protein; KEGG: eoj:ECO26_5460 putative transmembrane signal transducer

DNA sequence : 
GTGACTGCGCCACTTTCCAGCTCACAACGCGAAGCATTGCGCAGCGCTTCCCACTGGTACGCGGTACTGAGCGGCGAACG
GGTTAGTCCGCAGCAGGAAATAAAATGGCAGCGTTGGGTGGACGCCAACCAGGAAAACCAGTGGGCATGGCAGCAGGTGG
AGAATTTGCGCCAGCAAATGCAGGGCATGCCGGGAGAGGTTGCCAGCAAAGCATTACGTGATACGCCGATGACCCGCCGC
CATGTGTTGAAAGGCCTGTTGCTGGCGGTCGGCGTGGGTACCGGATGGCAGCTGTGGCAGACAGATTATGCCAGCGGGCT
GCGCGCGGATTATCGCACTGCGAAAGGTGAAATCCGCCACTACCCGCTGGATGATGGTAGCCTGCTGACGCTCGACACTG
CCTCGGCGGTGAATGTCACCTTCAGCGCCAGCGAGCGGCGTATCGATCTGATTGCCGGCATGCTGGCGATTACCACGGGC
AAAGATGCGGCGCAGCGTCCGTTGCGGGTGTATACGCGCCAGGGACAAATGACGGCGCTCGGTACTGCCTTTAGCGTGCA
ACAAAAGCGCGACAGCACGCTGCTGCGGGTGTCACAGCATGCAGTGGCGGTGCGCCTTGCTCAGGATGCAACACAAACCC
TTACCGTGCAGCAGGGGCAGAGCCTGCATTTCACCGCCGATCGTTTTGGCGCGCTGAGCCGCGATGCCGATAGCACGCCC
GCGTGGCTCAACGGCTGGCTCAGCGTAAGCGATCGTCCGCTGGGCGAGGTGATCGACCACCTGGCGCGCTACCGTCAGGG
GATGCTGCTGTGCGATGCCGATGCTGCCAGCCTGCGCGTCAGCGGCACTTTCCCGCTGTTGCACAGCGACCAGGTGTTGC
ACGCCCTTGAACAAACCCTGCCGATTACACTCCAGCGCATCACCCGCTATTGGGTGCGGGTGCAGCGGCGCTAA

Protein sequence : 
MTAPLSSSQREALRSASHWYAVLSGERVSPQQEIKWQRWVDANQENQWAWQQVENLRQQMQGMPGEVASKALRDTPMTRR
HVLKGLLLAVGVGTGWQLWQTDYASGLRADYRTAKGEIRHYPLDDGSLLTLDTASAVNVTFSASERRIDLIAGMLAITTG
KDAAQRPLRVYTRQGQMTALGTAFSVQQKRDSTLLRVSQHAVAVRLAQDATQTLTVQQGQSLHFTADRFGALSRDADSTP
AWLNGWLSVSDRPLGEVIDHLARYRQGMLLCDADAASLRVSGTFPLLHSDQVLHALEQTLPITLQRITRYWVRVQRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecR AAL08457.1 FecR Virulence SRL Protein 5e-82 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_4948 YP_004118804.1 anti-FecI sigma factor, FecR VFG1048 Protein 3e-82 59