Gene Information

Name : Pat9b_4138 (Pat9b_4138)
Accession : YP_004119258.1
Strain :
Genome accession: NC_014841
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4771
EC number : -
Position : 10423 - 12702 bp
Length : 2280 bp
Strand : +
Note : KEGG: cko:CKO_01682 outer membrane receptor FepA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug

DNA sequence :
ATGATGAAAACGACATACTCATATTCGCTACTGGCTGCTCTTATTGCGTGTAGCCTGGGAACGTCCCTGGCATTTGCAGA
CGAAGCGTCAGTACAACAGGGACAAACCAGCGCGCCAGACCAGAATGACCAACTGGCGATCAGCAATAAGAAAAGCAGCA
ACGACAATACCCTGGTCGTGACGGCTCGCGAGCAGACTCTGCAAGCACCCGGTGTCTCCATCATCGACAGCGAAGCCATC
AAAAAACACCCCATCCAACGTGATGTCTCTGAACTGATCCGCACCATGCCCGGCGTGAATCTGACGGGTAACTCCAATAG
CGGCCAACGCGGTAATAACCGCCAAATCGATATTCGCGGTATGGGACCGGAGAACACGCTGATTCTGGTTGACGGAATGC
CGGTCAGTAGCCGTAACTCGGTACGTTATGGATGGCGCGGCGAACGTGATACCCGCGGAGACAGCAACTGGGTGCCCCCC
GAAATGATTGACCGTATCGAAGTCATCCGTGGTCCGGCAGCGGCCCTGTATGGCAACGGTGCCATGGGAGGTGTAGTCAA
CATCATCACCAAACCGGCGGAAAAAGAGTGGCATGGTAATTTCAACACCTACTACAACGTGCCGGAACACAAATCCGAAG
GGGCCACCAAGCGTTACAACGCCAGCCTGAGTGGCGCGTTGGCGGATAATCTGACCCTGCGTCTGTACGGTAACTGGAGT
AAAACCCAGGCAGATGCACAGGATATTAACAGCGGGCATGAAGCGGAACGTACCGGTAAATACGCGGGTATGGTCCCGGC
GGGCCGTGAAGGGGTGATCAATAAAAATATTAATAGCGTGCTGCGCTGGGAATTTATGCCGATGCAGGCGCTGGAATTGA
ATGCCGGCTACAGTCGTCAGGGTAATCTTTATGCCGGTGATACGCAAAACACCAACAGTAGCACGCTGGTAAAGGAAAAC
TACGGCAAAGAAACCAACGTTATTTACCGTCAGACGCTTTCCCTGAAATATACCGGTGCCTGGGACAACGGCGTAACGAC
CAATAACTATATTCAGTTCGAGAAAACCCGTAATAAACGACTCAATGAGGGGCTGTCCGGCGGCCTGGAAGGATTGTTCA
GTACCACGGATGAAGGCTTTTCTACCATCGATCTGAACGATACCAACCTGCATTCCGAGGTGAATATTCCCTTTGACTGG
TGGGTCAGTCAGACCATCACCTTTGGTGCGGAAATGAATCATCAGACGATGAAAGATCCCACCTCCAATACCCTGGCGAA
TACTTCTGAGGTGGAGGGGGTCGCCAGTTCCGGGCGGAGCATCTACAGCTCAGCCGACATCTACGGGGTTTACACCGAAG
ATAATATTGACCTGACCGATTCCACTCGCCTGACACCGGGATTGCGCTTCAATCATCAAACCTACACTGGCAGCAATATC
AGTCCCTCCCTGAACCTGTCGCAGGATTTGGGGGATGACTTCACCCTGAAAATGGGTATTGCCCGTGCCTGGAAGGCCCC
GAACCTGTACCAGACCAATCCCAATTATTTGCTCTACAGCAGTGGTAACGGCTGTTACGCCAGCTCCACCAGCTGCTATT
TGCAGGGGAATAAGGATCTGAAGGCTGAAACCAGCGTCAATAAAGAGATCGGCATCGAGTACCATCATGAAGGGGTGCAG
GCAGGGCTGACCTGGTATCGTAACGATTACCACAACAAAATTGAGGCAGGTTACTCACCGGAGTACAGCAACGGCACGTC
AAATATTTACAAGTGGGAGAACGTACCAAAATCGGTCGTTCAGGGGCTGGAAGGCACACTGAACTTCCCGATCAGTGAAA
ACCTGACGATGAATAACAATTTCACCTGGATCATCGACAATAAAAACGAAACCTCTGGTGATTATCTGTCGATCATCCCG
AAATATACCATCAACTCCACACTGGACTGGCAGGCGACCAGCGCCCTCTCCGTGCAGGGAACCATGACATGGTATGGCCG
ACAAAAACCACCCAAATATAACTCGCAGGGCGATGACACCTCTGGCAGCGAGAAATGGCAGGTTTCTCCCTACGCAATTT
TTGGTGCCAGTGCGGTTTACAACATCAACAAGAATATCGATATCACGGCGGGTATCGATAACCTGCTGGATAAACGCCAT
TTCCGCGCAGGCAACGCCCTGACATCAGGTGCCAACGGCACCTACGCCTATGGAGCAGGGGCACGGACTTATAATGAGTC
GGGCCGGACATATTATATGGAGCTGGGTATGCATTTCTGA

Protein sequence :
MMKTTYSYSLLAALIACSLGTSLAFADEASVQQGQTSAPDQNDQLAISNKKSSNDNTLVVTAREQTLQAPGVSIIDSEAI
KKHPIQRDVSELIRTMPGVNLTGNSNSGQRGNNRQIDIRGMGPENTLILVDGMPVSSRNSVRYGWRGERDTRGDSNWVPP
EMIDRIEVIRGPAAALYGNGAMGGVVNIITKPAEKEWHGNFNTYYNVPEHKSEGATKRYNASLSGALADNLTLRLYGNWS
KTQADAQDINSGHEAERTGKYAGMVPAGREGVINKNINSVLRWEFMPMQALELNAGYSRQGNLYAGDTQNTNSSTLVKEN
YGKETNVIYRQTLSLKYTGAWDNGVTTNNYIQFEKTRNKRLNEGLSGGLEGLFSTTDEGFSTIDLNDTNLHSEVNIPFDW
WVSQTITFGAEMNHQTMKDPTSNTLANTSEVEGVASSGRSIYSSADIYGVYTEDNIDLTDSTRLTPGLRFNHQTYTGSNI
SPSLNLSQDLGDDFTLKMGIARAWKAPNLYQTNPNYLLYSSGNGCYASSTSCYLQGNKDLKAETSVNKEIGIEYHHEGVQ
AGLTWYRNDYHNKIEAGYSPEYSNGTSNIYKWENVPKSVVQGLEGTLNFPISENLTMNNNFTWIIDNKNETSGDYLSIIP
KYTINSTLDWQATSALSVQGTMTWYGRQKPPKYNSQGDDTSGSEKWQVSPYAIFGASAVYNINKNIDITAGIDNLLDKRH
FRAGNALTSGANGTYAYGAGARTYNESGRTYYMELGMHF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 7e-133 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_4138 YP_004119258.1 TonB-dependent siderophore receptor VFG0923 Protein 0.0 63
Pat9b_4138 YP_004119258.1 TonB-dependent siderophore receptor VFG0935 Protein 2e-132 50
Pat9b_4138 YP_004119258.1 TonB-dependent siderophore receptor VFG1650 Protein 4e-133 50